Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: mitochondrial matrix

Term: GO:0005759  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene79516 SustainPine v3.0 389
• AutoFact: putative mitochondrial processing peptidase [Arabidopsis thaliana] 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitochondrial processing peptidase 1.27e-12
Internal
sp_v3.0_unigene79790 SustainPine v3.0 326
• AutoFact: Citrate synthase n=1 Tax=Magnaporthe oryzae 70-15 RepID=Q2KGJ7_MAGO7 0.0
• FL-Next: sp=Citrate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Citrate synthase 5.57857e-42
Internal
sp_v3.0_unigene79795 SustainPine v3.0 141
• AutoFact: glutamate dehydrogenase [Brassica napus] dbj|BAE45943.1| glutamate dehydrogenase 2 [Brassica napus] 1.0e-10
• FL-Next: sp=Glutamate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Glutamate dehydrogenase 2.961e-25
Internal
sp_v3.0_unigene80049 SustainPine v3.0 278
• AutoFact: Lon-A peptidase [Acidovorax sp. JS42] gb|ABM41443.1| ATP-dependent proteinase [Acidovorax sp. JS42] 6.02558e-44
• FL-Next: sp=Lon protease homolog, mitochondrial; Phaeodactylum tricornutum (strain CCAP 1055/1). 0.0
• Sma3: Lon protease homolog 8.40779e-45
Internal
sp_v3.0_unigene80407 SustainPine v3.0 452
• AutoFact: Dihydrolipoyl dehydrogenase n=1 Tax=Tuber melanosporum Mel28 RepID=D5GGN7_TUBMM 0.0
• FL-Next: sp=Dihydrolipoyl dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dihydrolipoyl dehydrogenase 0.0
Internal
sp_v3.0_unigene80428 SustainPine v3.0 302
• AutoFact: Aspartate aminotransferase n=1 Tax=Picea sitchensis RepID=A9NUJ0_PICSI 7.0e-26
• FL-Next: sp=Aspartate aminotransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aspartate aminotransferase 2.597e-31
Misassembled
sp_v3.0_unigene80880 SustainPine v3.0 353
• AutoFact: Superoxide dismutase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D4D9_LACBS 0.0
• FL-Next: sp=Superoxide dismutase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Superoxide dismutase 0.0
Internal
sp_v3.0_unigene81151 SustainPine v3.0 265
• AutoFact: Cytochrome c C1 n=2 Tax=Agaricomycetes RepID=B0D4B4_LACBS 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c 0.0
Putative N-terminus
sp_v3.0_unigene81289 SustainPine v3.0 242
• AutoFact: Betaine-aldehyde dehydrogenase n=2 Tax=Euphorbiaceae RepID=B2BBY6_9ROSI 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Betaine aldehyde dehydrogenase 0.0
Internal
sp_v3.0_unigene81482 SustainPine v3.0 215
• AutoFact: propionyl-CoA carboxylase [Marinobacter aquaeolei VT8] gb|ABM19202.1| Propionyl-CoA carboxylase [Marinobacter aquaeolei VT8] 1.0e-24
• FL-Next: sp=Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene100250 SustainPine v3.0 436
• AutoFact: Electron transfer flavoprotein subunit alpha [Arabidopsis thaliana] sp|Q9C6I6.1|ETFA_ARATH RecName: Full=Electron transfer flavoprotein subunit alpha, mitochondrial; Short=Alpha-ETF; Flags: Precursor gb|AAG50941.1|AC079284_16 electron transport flavoprote 2.0e-32
• FL-Next: sp=Electron transfer flavoprotein subunit alpha, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Electron transfer flavoprotein subunit alpha, mitochondrial 7.78e-09
Internal
sp_v3.0_unigene100390 SustainPine v3.0 1817
• AutoFact: Putative aldehyde dehydrogenase n=1 Tax=Oryza sativa Japonica Group RepID=Q6L5I4_ORYSJ 0.0
• FL-Next: sp=Probable aldehyde dehydrogenase; Linum usitatissimum (Flax) (Linum humile). 0.0
• Sma3: Aldehyde dehydrogenase 5.728e-09
Complete
sp_v3.0_unigene100966 SustainPine v3.0 855
• AutoFact: Thioredoxin reductase n=1 Tax=Picea sitchensis RepID=B8LRB6_PICSI 0.0
• FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin reductase 0.0
Internal
sp_v3.0_unigene101431 SustainPine v3.0 576
• AutoFact: LON protease homologue [Lithospermum erythrorhizon] 6.0e-15
• FL-Next: sp=Lon protease homolog 2, peroxisomal; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Lon protease homolog 1.445e-09
C-terminus
sp_v3.0_unigene102305 SustainPine v3.0 542
• AutoFact: Acetyl-CoA carboxylase, putative n=1 Tax=Ricinus communis RepID=B9SFG9_RICCO 1.0e-19
• FL-Next: sp=Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 7.328e-13
C-terminus
sp_v3.0_unigene102910 SustainPine v3.0 579
• AutoFact: Isoform 2 of Lon protease homolog, mitochondrial n=2 Tax=Oryza sativa RepID=Q69UZ3-2 0.0
• FL-Next: Isoform 2 of Lon protease homolog, mitochondrial OS=Oryza sativa subsp. japonica GN=Os07g0689300 0.0
• Sma3: Lon protease homolog 6.743e-36
Internal
sp_v3.0_unigene106465 SustainPine v3.0 231
• AutoFact: Cytochrome c n=21 Tax=Euteleostomi RepID=CYC_HUMAN 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c 0.0
Putative N-terminus
sp_v3.0_unigene115446 SustainPine v3.0 412
• AutoFact: proline dehydrogenase [Actinidia deliciosa] 7.0e-13
• FL-Next: sp=Proline dehydrogenase 2, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Proline dehydrogenase 4.47e-15
C-terminus
sp_v3.0_unigene115958 SustainPine v3.0 335
• AutoFact: Isovaleryl-CoA dehydrogenase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NEH1_COPC7 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Isovaleryl-CoA dehydrogenase 1.093e-08
C-terminus
sp_v3.0_unigene116083 SustainPine v3.0 320
• AutoFact: Thioredoxin reductase n=2 Tax=Picea sitchensis RepID=A9NXV4_PICSI 0.0
• FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin reductase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain