Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: one-carbon metabolic process

Term: GO:0006730  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2934 SustainPine v3.0 1616
AutoFact: putative rRNA-processing protein EBP2-like protein [Arabidopsis thaliana] sp|Q9LUJ5.1|EBP2_ARATH RecName: Full=Probable rRNA-processing protein EBP2 homolog dbj|BAB01241.1| nucleolar protein-like [Arabidopsis thaliana] gb|AAL24270.1| AT3g22660/MWI23_3 [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3027 SustainPine v3.0 1764
AutoFact: S-adenosylmethionine synthase 1 n=24 Tax=Tracheophyta RepID=METK1_VITVI 0.0
FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
Sma3: MAT 1 0.0
Complete
sp_v3.0_unigene3028 SustainPine v3.0 933
AutoFact: S-adenosylmethionine synthase 1 (Fragment) n=2 Tax=Magnoliophyta RepID=METK1_PETCR 0.0
FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
Sma3: S-adenosylmethionine synthetase 6.455e-40
C-terminus
sp_v3.0_unigene4387 SustainPine v3.0 1002
AutoFact: Neutral amino acid transport protein n=1 Tax=Populus trichocarpa RepID=B9GLG7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Neutral amino acid transport protein 4.111e-18
N-terminus
sp_v3.0_unigene4630 SustainPine v3.0 270
AutoFact: S-adenosyl methionine synthetase 2 (Fragment) n=10 Tax=Pinaceae RepID=Q5EK82_PINTA 1.0e-27
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 1.326e-21
Putative C-terminus
sp_v3.0_unigene4705 SustainPine v3.0 1204
AutoFact: S-adenosylmethionine synthase 3 n=6 Tax=Embryophyta RepID=METK3_ARATH 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 2.202e-35
C-terminus
sp_v3.0_unigene4771 SustainPine v3.0 555
AutoFact: Serine hydroxymethyltransferase n=4 Tax=Arabidopsis RepID=Q8GRI1_ARATH 6.0e-08
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Putative C-terminus
sp_v3.0_unigene4912 SustainPine v3.0 1122
AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 1.285e-35
C-terminus
sp_v3.0_unigene8003 SustainPine v3.0 1882
AutoFact: putative rRNA-processing protein EBP2-like protein [Arabidopsis thaliana] sp|Q9LUJ5.1|EBP2_ARATH RecName: Full=Probable rRNA-processing protein EBP2 homolog dbj|BAB01241.1| nucleolar protein-like [Arabidopsis thaliana] gb|AAL24270.1| AT3g22660/MWI23_3 [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene10307 SustainPine v3.0 1754
AutoFact: S-adenosylmethionine synthase 1 n=24 Tax=Tracheophyta RepID=METK1_VITVI 0.0
FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
Sma3: MAT 1 0.0
Complete
sp_v3.0_unigene10438 SustainPine v3.0 1414
AutoFact: Amino acid transporter, putative n=1 Tax=Ricinus communis RepID=B9S1L4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Neutral amino acid transport protein 3.3e-18
Putative C-terminus
sp_v3.0_unigene11777 SustainPine v3.0 3052
AutoFact: Adenosylhomocysteinase n=6 Tax=Tracheophyta RepID=A9NUB8_PICSI 0.0
FL-Next: sp=Adenosylhomocysteinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12747 SustainPine v3.0 1041
AutoFact: serine hydroxymethyltransferase 7 [Arabidopsis thaliana] gb|AAO22567.1| putative hydroxymethyltransferase [Arabidopsis thaliana] gb|AEE31862.1| serine hydroxymethyltransferase 7 [Arabidopsis thaliana] 1.0e-33
FL-Next: sp=Serine hydroxymethyltransferase; Pinus pinaster (Maritime pine). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
N-terminus
sp_v3.0_unigene13134 SustainPine v3.0 749
AutoFact: Amino acid permease, putative n=3 Tax=Arabidopsis RepID=Q9C6S5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Neutral amino acid transport protein 3.394e-18
N-terminus
sp_v3.0_unigene16457 SustainPine v3.0 778
AutoFact: Amino acid permease family protein n=3 Tax=Oryza sativa RepID=Q10KP6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Amino acid transporter, putative 2.15e-16
Putative C-terminus
sp_v3.0_unigene16746 SustainPine v3.0 957
AutoFact: putative carbonic anhydrase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Carbonic anhydrase, putative 1.165e-25
Complete
sp_v3.0_unigene16757 SustainPine v3.0 1068
AutoFact: Carbonic anhydrase, putative n=1 Tax=Ricinus communis RepID=B9STU9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Carbonic anhydrase, putative 2.846e-22
Complete
sp_v3.0_unigene17097 SustainPine v3.0 2372
AutoFact: Adenosylhomocysteinase n=6 Tax=Tracheophyta RepID=A9NUB8_PICSI 0.0
FL-Next: sp=Adenosylhomocysteinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene18505 SustainPine v3.0 1031
AutoFact: S-adenosylmethionine synthase 2 (Fragment) n=3 Tax=core eudicotyledons RepID=METK2_PETCR 5.0e-35
FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
Sma3: S-adenosylmethionine synthetase 8.296e-34
Misassembled
sp_v3.0_unigene20385 SustainPine v3.0 1227
AutoFact: Carbonic anhydrase, putative n=1 Tax=Ricinus communis RepID=B9STU9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain