Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: one-carbon metabolic process

Term: GO:0006730  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene127199 SustainPine v3.0 811
AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 8.53e-36
Internal
sp_v3.0_unigene129425 SustainPine v3.0 488
AutoFact: S-adenosylmethionine synthase 1 (Fragment) n=2 Tax=Magnoliophyta RepID=METK1_PETCR 0.0
FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
Sma3: S-adenosylmethionine synthetase 2.51701e-41
C-terminus
sp_v3.0_unigene131062 SustainPine v3.0 416
AutoFact: carbonic anhydrase [Arabidopsis thaliana] gb|AAM67440.1| putative storage protein [Arabidopsis thaliana] gb|AEE28240.1| carbonic anhydrase [Arabidopsis thaliana] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Carbonic anhydrase, putative 1.939e-11
Internal
sp_v3.0_unigene131137 SustainPine v3.0 556
AutoFact: S-adenosylmethionine synthase 3 n=6 Tax=Embryophyta RepID=METK3_ARATH 6.0e-13
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 4.595e-39
Misassembled
sp_v3.0_unigene131866 SustainPine v3.0 277
AutoFact: Bifunctional dihydrofolate reductase-thymidylate synthase 2 n=2 Tax=Arabidopsis RepID=DRTS2_ARATH 8.0e-26
FL-Next: sp=Bifunctional dihydrofolate reductase-thymidylate synthase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Thymidylate synthase 1.803e-29
C-terminus
sp_v3.0_unigene132410 SustainPine v3.0 537
AutoFact: carbonic anhydrase [Arabidopsis thaliana] gb|AAM67440.1| putative storage protein [Arabidopsis thaliana] gb|AEE28240.1| carbonic anhydrase [Arabidopsis thaliana] 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene132790 SustainPine v3.0 421
AutoFact: Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Lotus japonicus RepID=B0BLI5_LOTJA 1.0e-20
FL-Next: sp=Bifunctional dihydrofolate reductase-thymidylate synthase; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Thymidylate synthase 9.516e-30
Internal
sp_v3.0_unigene134091 SustainPine v3.0 461
AutoFact: Adenosylhomocysteinase n=6 Tax=Tracheophyta RepID=A9NUB8_PICSI 9.80909e-45
FL-Next: sp=Adenosylhomocysteinase; Pinus pinaster (Maritime pine). 0.0
Sma3: Adenosylhomocysteinase 0.0
C-terminus
sp_v3.0_unigene135865 SustainPine v3.0 340
AutoFact: 10-formyltetrahydrofolate synthetase n=3 Tax=rosids RepID=B9GLK3_POPTR 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Formyltetrahydrofolate synthetase 2.544e-09
Internal
sp_v3.0_unigene140616 SustainPine v3.0 731
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene140885 SustainPine v3.0 364
AutoFact: S-adenosylmethionine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TIR8_VITVI 0.0
FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
Sma3: S-adenosylmethionine synthetase 2.077e-41
Putative C-terminus
sp_v3.0_unigene141526 SustainPine v3.0 219
AutoFact: S-adenosylmethionine synthetase (Fragment) n=1 Tax=Salvia miltiorrhiza RepID=Q84RM7_SALMI 5.0e-18
FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
Sma3: AdoMet synthetase 2 5.378e-21
Internal
sp_v3.0_unigene143310 SustainPine v3.0 823
AutoFact: Carbonic anhydrase, putative n=1 Tax=Ricinus communis RepID=B9STU9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Carbonic anhydrase, putative 9.127e-14
Complete
sp_v3.0_unigene143824 SustainPine v3.0 677
AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NZU9_PICSI 0.0
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
C-terminus
sp_v3.0_unigene143930 SustainPine v3.0 329
AutoFact: alpha carbonic anhydrase 6 [Arabidopsis thaliana] emb|CAB45895.1| carbonic anhydrase-like protein [Arabidopsis thaliana] emb|CAB79100.1| carbonic anhydrase-like protein [Arabidopsis thaliana] gb|AEE84386.1| alpha carbonic anhydrase 6 [Arabidopsis thaliana 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene144145 SustainPine v3.0 1155
AutoFact: RecName: Full=S-adenosylmethionine synthase 2; Short=AdoMet synthase 2; AltName: Full=Methionine adenosyltransferase 2; Short=MAT 2 gb|AAG17036.1|AF187821_1 S-adenosylmethionine synthetase [Pinus contorta] 0.0
FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: Methionine S-adenosyl transferase 1.26e-35
Complete
sp_v3.0_unigene145182 SustainPine v3.0 379
AutoFact: S-adenosyl methionine synthetase 2 (Fragment) n=10 Tax=Pinaceae RepID=Q5EK82_PINTA 1.0e-25
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 4.63e-31
C-terminus
sp_v3.0_unigene145599 SustainPine v3.0 572
AutoFact: Adenosylhomocysteinase n=6 Tax=Tracheophyta RepID=A9NUB8_PICSI 4.0e-20
FL-Next: sp=Adenosylhomocysteinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Adenosylhomocysteinase 0.0
C-terminus
sp_v3.0_unigene145695 SustainPine v3.0 975
AutoFact: S-adenosylmethionine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TIR8_VITVI 0.0
FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: Methionine S-adenosyl transferase 1.44e-35
C-terminus
sp_v3.0_unigene146074 SustainPine v3.0 684
AutoFact: RecName: Full=S-adenosylmethionine synthase 2; Short=AdoMet synthase 2; AltName: Full=Methionine adenosyltransferase 2; Short=MAT 2 gb|AAA33274.1| S-adenosylmethionine synthetase [Dianthus caryophyllus] prf||1802406A Met(S-adenosyl) synthetase 9.80909e-45
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 4.056e-36
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain