Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Uncharacterised protein family Cys-rich

Term: IPR006461  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene188581 SustainPine v3.0 358
AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 7.502e-08
C-terminus
sp_v3.0_unigene192614 SustainPine v3.0 614
AutoFact: 29-kDa galactose-binding lectin n=3 Tax=Lumbricus terrestris RepID=O96048_LUMTE 7.0e-08
coding
sp_v3.0_unigene194112 SustainPine v3.0 322
AutoFact: pentatricopeptide (PPR) repeat-containing protein-like protein [Oryza sativa Japonica Group] dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein [Oryza sativa Japonica Group] 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.689e-25
Internal
sp_v3.0_unigene195678 SustainPine v3.0 399
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g30700; AltName: Full=Protein DYW9 emb|CAB52443.1| putative protein [Arabidopsis thaliana] emb|CAB79788 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 3.153e-31
C-terminus
sp_v3.0_unigene196691 SustainPine v3.0 419
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 9.004e-08
Internal
sp_v3.0_unigene196901 SustainPine v3.0 324
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V0_PICAB 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene199066 SustainPine v3.0 428
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 5.619e-36
C-terminus
sp_v3.0_unigene199382 SustainPine v3.0 447
AutoFact: Unassigned protein 1.96182e-44
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Putative uncharacterized protein 5.185e-14
C-terminus
sp_v3.0_unigene202024 SustainPine v3.0 469
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 9.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.053e-22
Internal
sp_v3.0_unigene204405 SustainPine v3.0 309
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.962e-31
C-terminus
sp_v3.0_unigene204986 SustainPine v3.0 472
AutoFact: Spherulin 3b n=1 Tax=Physarum polycephalum RepID=Q4U3C9_PHYPO 7.0e-05
Sma3: Glycine-rich protein A3 3.429e-12
coding
sp_v3.0_unigene206551 SustainPine v3.0 629
AutoFact: PLAC8 family protein [Arabidopsis thaliana] gb|AAM61188.1| unknown [Arabidopsis thaliana] gb|ABD91492.1| At1g11380 [Arabidopsis thaliana] gb|AEE28728.1| PLAC8 family protein [Arabidopsis thaliana] 6.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain