Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Uncharacterised protein family Cys-rich

Term: IPR006461  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene165624 SustainPine v3.0 400
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RIP1_RICCO 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 1.184e-14
C-terminus
sp_v3.0_unigene165980 SustainPine v3.0 303
• AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene166387 SustainPine v3.0 451
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZU8_ORYSJ 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polyprotein, putative 1.953e-06
N-terminus
sp_v3.0_unigene166640 SustainPine v3.0 340
• AutoFact: PLAC8 domain containing protein 5.04467e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PGPS/D12 8.391e-20
Putative N-terminus
sp_v3.0_unigene167043 SustainPine v3.0 215
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene167218 SustainPine v3.0 188
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.31e-06
C-terminus
sp_v3.0_unigene167601 SustainPine v3.0 309
• AutoFact: Unassigned protein 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene167828 SustainPine v3.0 328
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170 emb|CAB36791.1| putative protein [Arabidopsis thaliana] emb|CAB80034.1| putative protein [Arabid 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 5.206e-10
C-terminus
sp_v3.0_unigene167916 SustainPine v3.0 324
• AutoFact: Putaive copia-like retrotransposon polyprotein, 5'-partial (Fragment) n=2 Tax=Oryza sativa RepID=Q8W5D1_ORYSA 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.34e-35
Internal
sp_v3.0_unigene168341 SustainPine v3.0 223
• AutoFact: PLAC8 domain-containing protein [Arabidopsis thaliana] ref|NP_849503.1| PLAC8 domain-containing protein [Arabidopsis thaliana] ref|NP_849504.2| PLAC8 domain-containing protein [Arabidopsis thaliana] sp|Q8L7E9.1|MCAC1_ARATH RecName: Full=Protein MID1-COMPL 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene170141 SustainPine v3.0 445
• AutoFact: DUF1421 multi-domain protein 3.0e-14
• Sma3: Proline-glycine-tyrosine rich protein 7.797e-06
coding
sp_v3.0_unigene171337 SustainPine v3.0 290
• AutoFact: FAP multi-domain protein 8.0e-08
• Sma3: cDNA clone:J023104E19, full insert sequence 8.285e-06
coding
sp_v3.0_unigene172409 SustainPine v3.0 266
• AutoFact: Bindin multi-domain protein 2.0e-07
• Sma3: Glycine-rich protein A3 1.097e-08
coding
sp_v3.0_unigene172972 SustainPine v3.0 256
• AutoFact: WWbp multi-domain protein 2.0e-14
• Sma3: EF hand family protein, expressed 7.643e-08
coding
sp_v3.0_unigene174498 SustainPine v3.0 385
• AutoFact: WWbp multi-domain protein 5.0e-11
coding
sp_v3.0_unigene183094 SustainPine v3.0 398
• AutoFact: Cell number regulator 4 n=1 Tax=Zea mays RepID=CNR4_MAIZE 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene185054 SustainPine v3.0 292
• AutoFact: Protein PLANT CADMIUM RESISTANCE 4 n=1 Tax=Arabidopsis thaliana RepID=PCR4_ARATH 2.0e-06
• FL-Next: tr=Putative ORFX; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
C-terminus
sp_v3.0_unigene186475 SustainPine v3.0 540
• AutoFact: PLAC8 family protein [Arabidopsis thaliana] sp|Q9M9A5.1|PCR6_ARATH RecName: Full=Protein PLANT CADMIUM RESISTANCE 6; Short=AtPCR6 gb|AAF69715.1|AC016041_20 F27J15.18 [Arabidopsis thaliana] gb|AAR24706.1| At1g49030 [Arabidopsis thaliana] gb|AAS47652.1| At1 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Genomic DNA, chromosome 3, P1 clone: MYF24 2.074e-12
C-terminus
sp_v3.0_unigene186545 SustainPine v3.0 653
• AutoFact: Spherulin 3b n=1 Tax=Physarum polycephalum RepID=Q4U3C9_PHYPO 8.0e-08
• FL-Next: tr=Predicted protein; Micromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga). 0.0
• Sma3: Putative glycine and proline-rich protein 4.755e-09
Putative N-terminus
sp_v3.0_unigene187297 SustainPine v3.0 429
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain