|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v3.0_unigene3523
|
SustainPine v3.0
|
2421
|
|
• AutoFact: pre-mRNA-processing factor 39 [Arabidopsis thaliana] gb|AAL07170.1| unknown protein [Arabidopsis thaliana] gb|AAM14126.1| unknown protein [Arabidopsis thaliana] gb|AAM65430.1| unknown [Arabidopsis thaliana] gb|AEE27652.1| pre-mRNA-processing factor 39 [Ar
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Pre-mRNA-processing protein prp39, putative
|
2.848e-09
|
|
C-terminus
|
|
sp_v3.0_unigene3526
|
SustainPine v3.0
|
2395
|
|
• AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Transmembrane 9 superfamily protein member 1
|
1.744e-11
|
|
Complete
|
|
sp_v3.0_unigene3703
|
SustainPine v3.0
|
2623
|
|
• AutoFact: putative U2-associated SR140 protein [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Putative C-terminus
|
|
sp_v3.0_unigene3828
|
SustainPine v3.0
|
2917
|
|
• AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: DsRNA-specific nuclease dicer and related ribonuclease
|
1.06e-11
|
|
Putative Complete
|
|
sp_v3.0_unigene4644
|
SustainPine v3.0
|
429
|
|
• AutoFact: Magnesium chelatase H subunit n=2 Tax=Rosaceae RepID=C1KIZ6_PRUPE
|
0.0
|
|
• FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Sma3: Magnesium-chelatase subunit chlH chloroplast
|
3.861e-09
|
|
Internal
|
|
sp_v3.0_unigene4650
|
SustainPine v3.0
|
125
|
|
• AutoFact: Pre-rRNA processing protein RRP5 n=3 Tax=Arabidopsis thaliana RepID=Q9LHM6_ARATH
|
2.0e-08
|
|
• FL-Next: tr=Pre-rRNA processing protein RRP5; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene5392
|
SustainPine v3.0
|
1686
|
|
• AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence
|
0.0
|
|
Complete
|
|
sp_v3.0_unigene5506
|
SustainPine v3.0
|
1661
|
|
• AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t
|
0.0
|
|
• FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
N-terminus
|
|
sp_v3.0_unigene5856
|
SustainPine v3.0
|
2450
|
|
• AutoFact: cell cycle control crn (crooked neck) protein-like [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii).
|
0.0
|
|
• Sma3: Putative uncharacterized protein
|
0.0
|
|
C-terminus
|
|
sp_v3.0_unigene6092
|
SustainPine v3.0
|
1290
|
|
• AutoFact: Ribonuclease III-like protein [Arabidopsis thaliana] gb|AAQ62445.1| At1g55140 [Arabidopsis thaliana] dbj|BAD42926.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33190.1| Ribonuclease III-like protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Complete
|
|
sp_v3.0_unigene6200
|
SustainPine v3.0
|
2808
|
|
• AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAF82198.1|AC067971_6 Contains similarity to an unknown protein T2J13.180 gi|6522568 from Arabidopsis thaliana BAC T2J13 gb|AL132967. ESTs gb|Z29835 and gb|Z29836 come from this gene gb|AEE28094.1| unchara
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: KDEL motif-containing protein 1, putative
|
5.638e-20
|
|
Complete
|
|
sp_v3.0_unigene6224
|
SustainPine v3.0
|
1712
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
C-terminus
|
|
sp_v3.0_unigene6329
|
SustainPine v3.0
|
1264
|
|
• AutoFact: Peptidase S8 and S53, subtilisin, kexin, sedolisin; 3 exoribonuclease [Medicago truncatula]
|
0.0
|
|
• FL-Next: sp=Exosome complex exonuclease RRP46 homolog; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
Complete
|
|
sp_v3.0_unigene6819
|
SustainPine v3.0
|
2803
|
|
• AutoFact: cleavage stimulation factor 77 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
C-terminus
|
|
sp_v3.0_unigene6890
|
SustainPine v3.0
|
1026
|
|
• AutoFact: Endoribonuclease Dicer homolog 1 n=4 Tax=Poaceae RepID=DCL1_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Dicer-like protein
|
7.19e-13
|
|
Putative Complete
|
|
sp_v3.0_unigene6931
|
SustainPine v3.0
|
1578
|
|
• AutoFact: XPA-binding protein, putative; K12867 pre-mRNA-splicing factor SYF1
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
C-terminus
|
|
sp_v3.0_unigene7302
|
SustainPine v3.0
|
2289
|
|
• AutoFact: Exosome complex exonuclease rrp45, putative n=1 Tax=Ricinus communis RepID=B9SYQ9_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Sma3: Nucleolar autoantigen-like protein
|
5.58e-09
|
|
Complete
|
|
sp_v3.0_unigene7363
|
SustainPine v3.0
|
1031
|
|
• AutoFact: SWAP/Surp domain-containing protein [Arabidopsis thaliana] gb|AAK64161.1| unknown protein [Arabidopsis thaliana] gb|AAM20098.1| unknown protein [Arabidopsis thaliana] gb|AED96581.1| SWAP/Surp domain-containing protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
Putative N-terminus
|
|
sp_v3.0_unigene7905
|
SustainPine v3.0
|
1944
|
|
• AutoFact: symplekin [Arabidopsis thaliana] dbj|BAF00598.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30851.1| symplekin [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
C-terminus
|
|
sp_v3.0_unigene8064
|
SustainPine v3.0
|
1915
|
|
• AutoFact: magnesium chelatase subunit [Glycine max]
|
0.0
|
|
• FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: Magnesium-chelatase subunit chlh-like protein chloroplast
|
6.584e-09
|
|
C-terminus
|
