Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L1, 2-layer alpha/beta-sandwich

Term: IPR016094  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene75058 SustainPine v3.0 266
• AutoFact: 60s ribosomal protein L10A n=1 Tax=Glossina morsitans morsitans RepID=D3TMC2_GLOMM 4.0e-29
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.605e-34
Internal
sp_v3.0_unigene77025 SustainPine v3.0 201
• AutoFact: Chain A, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|A Chain A, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 4.0e-16
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 5.82e-30
Internal
sp_v3.0_unigene77291 SustainPine v3.0 312
• AutoFact: 50S ribosomal protein L1 n=1 Tax=Zea mays RepID=B6TB66_MAIZE 6.0e-16
• FL-Next: sp=Ribosomal protein; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
C-terminus
sp_v3.0_unigene78565 SustainPine v3.0 251
• AutoFact: Ribosomal protein n=1 Tax=Picea sitchensis RepID=A9P244_PICSI 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L1, chloroplastic 0.0
Internal
sp_v3.0_unigene119844 SustainPine v3.0 519
• AutoFact: Ribosomal protein n=2 Tax=Chlorella RepID=A9XHZ2_CHLVU 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 8.709e-38
C-terminus
sp_v3.0_unigene128081 SustainPine v3.0 821
• AutoFact: Ribosomal protein (Fragment) n=7 Tax=Spermatophyta RepID=D7TJ68_VITVI 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 8.709e-38
Complete
sp_v3.0_unigene133792 SustainPine v3.0 623
• AutoFact: EMP70 multi-domain protein 9.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transmembrane 9 superfamily protein member 1 8.983e-12
C-terminus
sp_v3.0_unigene137596 SustainPine v3.0 418
• AutoFact: EMP70 domain containing protein 7.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transporter, putative 3.983e-09
Internal
sp_v3.0_unigene151050 SustainPine v3.0 345
• AutoFact: S60 ribosomal protein L10a n=1 Tax=Polysphondylium pallidum RepID=D3BAC7_POLPA 6.0e-30
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 3.93e-29
Putative C-terminus
sp_v3.0_unigene151324 SustainPine v3.0 264
• AutoFact: PREDICTED: similar to L10a n=1 Tax=Hydra magnipapillata RepID=UPI0001927716 1.0e-19
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.366e-36
C-terminus
sp_v3.0_unigene151367 SustainPine v3.0 346
• AutoFact: Ribosomal protein n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CFH4_9EUKA 2.0e-34
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.059e-38
C-terminus
sp_v3.0_unigene154216 SustainPine v3.0 250
• AutoFact: Putative 60S ribosomal protein L10a n=5 Tax=Leishmania RepID=A4HXT8_LEIIN 8.0e-30
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 7.648e-30
Putative C-terminus
sp_v3.0_unigene154560 SustainPine v3.0 308
• AutoFact: Ribosomal protein n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3K2F5_PUCGT 1.0e-32
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 2.483e-37
Internal
sp_v3.0_unigene154912 SustainPine v3.0 252
• AutoFact: PREDICTED: 60S ribosomal protein L10a-like n=1 Tax=Pongo abelii RepID=UPI0001D5E81F 1.0e-24
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 8.052e-33
C-terminus
sp_v3.0_unigene155420 SustainPine v3.0 367
• AutoFact: 60S ribosomal protein L10a, putative n=1 Tax=Schistosoma mansoni RepID=C4Q8P4_SCHMA 4.0e-27
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 6.095e-33
C-terminus
sp_v3.0_unigene155667 SustainPine v3.0 558
• AutoFact: 50S ribosomal protein L1 n=34 Tax=Pseudomonas RepID=RL1_PSE14 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.26e-38
Internal
sp_v3.0_unigene155880 SustainPine v3.0 248
• AutoFact: L1P family of ribosomal proteins containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22UX9_TETTH 7.0e-18
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 9.227e-25
N-terminus
sp_v3.0_unigene155920 SustainPine v3.0 412
• AutoFact: Ribosomal protein n=2 Tax=Chlorella RepID=A9XHZ2_CHLVU 9.94922e-44
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.52e-37
N-terminus
sp_v3.0_unigene156074 SustainPine v3.0 313
• AutoFact: 60S ribosomal protein L10a, putative n=2 Tax=Euphorbiaceae RepID=B9SCT8_RICCO 3.0e-22
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.231e-34
Putative N-terminus
sp_v3.0_unigene157166 SustainPine v3.0 250
• AutoFact: Ribosomal protein n=3 Tax=Chromadorea RepID=A8NG31_BRUMA 2.0e-14
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.108e-33
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain