Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytoskeleton

Term: GO:0005856  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene63180 SustainPine v3.0 265
• AutoFact: actin [Musa acuminata AAA Group] 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Actin-2 7.24e-07
Putative N-terminus
sp_v3.0_unigene63675 SustainPine v3.0 245
• AutoFact: Actin (Fragment) n=6 Tax=Magnoliophyta RepID=B0FNN7_9ROSI 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; subsp. trichocarpa). 0.0
• Sma3: Actin 3.562e-19
Complete
sp_v3.0_unigene63766 SustainPine v3.0 187
• AutoFact: Actin (Fragment) n=1 Tax=Gladiolus hybrid cultivar RepID=Q6L655_9ASPA 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT3G18780 protein 3.884e-08
Internal
sp_v3.0_unigene64180 SustainPine v3.0 173
• AutoFact: putative spindle disassembly related protein CDC48 [Nicotiana tabacum] 5.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division cycle protein 48 9.071e-15
Internal
sp_v3.0_unigene64243 SustainPine v3.0 208
• AutoFact: Actin-like protein (Fragment) n=3 Tax=Bauhinia RepID=D5K102_9FABA 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Actin 1.825e-14
Internal
sp_v3.0_unigene64335 SustainPine v3.0 165
• AutoFact: chaperone protein dnaJ 15 [Arabidopsis thaliana] sp|Q9ZSY2.1|DNJ15_ARATH RecName: Full=Chaperone protein dnaJ 15; Short=AtDjB15; Short=AtJ15; AltName: Full=Protein ALTERED RESPONSE TO GRAVITY; Short=AtARG1 gb|AAF26045.1|AC015986_8 ARG1 protein (Altered Re 9.0e-08
• FL-Next: sp=Chaperone protein dnaJ 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chaperone protein dnaJ 15 1.354e-09
N-terminus
sp_v3.0_unigene64666 SustainPine v3.0 181
• AutoFact: Protein SCAR2, putative n=1 Tax=Ricinus communis RepID=B9SL38_RICCO 4.0e-19
• FL-Next: sp=SCAR-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene64738 SustainPine v3.0 224
• AutoFact: Actin-like protein (Fragment) n=3 Tax=Bauhinia RepID=D5K102_9FABA 5.0e-21
• FL-Next: tr=Actin 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Actin 4 6.017e-08
Internal
sp_v3.0_unigene64871 SustainPine v3.0 213
• AutoFact: chaperone protein dnaJ 15 [Arabidopsis thaliana] sp|Q9ZSY2.1|DNJ15_ARATH RecName: Full=Chaperone protein dnaJ 15; Short=AtDjB15; Short=AtJ15; AltName: Full=Protein ALTERED RESPONSE TO GRAVITY; Short=AtARG1 gb|AAF26045.1|AC015986_8 ARG1 protein (Altered Re 1.0e-12
• FL-Next: sp=Chaperone protein dnaJ 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chaperone protein dnaJ 16 1.103e-08
Internal
sp_v3.0_unigene65490 SustainPine v3.0 113
• AutoFact: Ubiquitin n=2 Tax=Dictyosteliida RepID=D3AVZ4_POLPA 7.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polyubiquitin 2 1.021e-07
Internal
sp_v3.0_unigene65492 SustainPine v3.0 264
• AutoFact: transitional endoplasmic reticulum ATPase - Arabidopsis thaliana emb|CAB83290.1| transitional endoplasmic reticulum ATPase [Arabidopsis thaliana] 6.0e-18
• FL-Next: sp=Cell division control protein 48 homolog D; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cell division cycle protein 48 homolog 5.252e-08
C-terminus
sp_v3.0_unigene65510 SustainPine v3.0 122
• AutoFact: Ubiquitin/actin fusion protein 2 n=7 Tax=Eukaryota RepID=Q7XBP8_BIGNA 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polyubiquitin 2 1.021e-07
Internal
sp_v3.0_unigene65569 SustainPine v3.0 97
• AutoFact: Ubiquitin n=1 Tax=Riftia pachyptila RepID=B0B068_RIFPA 6.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65608 SustainPine v3.0 172
• AutoFact: RecName: Full=Cell division cycle protein 48 homolog; AltName: Full=Valosin-containing protein homolog; Short=VCP gb|AAA80587.1| valosin-containing protein [Glycine max] gb|ABC87759.1| plamsma membrane-associated AAA-ATPase [Glycine max] 1.0e-10
• FL-Next: sp=Cell division cycle protein 48 homolog; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Cell division cycle protein 48 homolog 6.813e-12
Internal
sp_v3.0_unigene65637 SustainPine v3.0 116
• AutoFact: Ubiquitin/actin fusion protein 2 n=7 Tax=Eukaryota RepID=Q7XBP8_BIGNA 1.0e-08
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Polyubiquitin 2 1.015e-07
Internal
sp_v3.0_unigene65770 SustainPine v3.0 97
• AutoFact: [O] COG5272 Ubiquitin 9.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65808 SustainPine v3.0 111
• AutoFact: Polyprotein n=97 Tax=Bovine viral diarrhea virus 1 RepID=Q65815_BVDV 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65825 SustainPine v3.0 99
• AutoFact: [O] COG5272 Ubiquitin 1.0e-10
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative C-terminus
sp_v3.0_unigene65883 SustainPine v3.0 139
• AutoFact: Unassigned protein
• FL-Next: sp=Cell division control protein 48 homolog A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cell division cycle protein 48 homolog 5.889e-08
Internal
sp_v3.0_unigene66723 SustainPine v3.0 473
• AutoFact: Fimbrin, putative n=1 Tax=Ricinus communis RepID=B9T216_RICCO 7.0e-21
• FL-Next: sp=Fimbrin-like protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Fimbrin, putative 1.607e-09
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain