Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytoskeleton

Term: GO:0005856  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene18113 SustainPine v3.0 1890
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 0.0
Complete
sp_v3.0_unigene18842 SustainPine v3.0 537
AutoFact: Villin headpiece; Gelsolin region n=1 Tax=Medicago truncatula RepID=A2Q391_MEDTR 9.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative villin 3.187e-08
Putative N-terminus
sp_v3.0_unigene19054 SustainPine v3.0 530
AutoFact: Actin (Fragment) n=4 Tax=core eudicotyledons RepID=A7LHF2_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.602e-11
Internal
sp_v3.0_unigene19347 SustainPine v3.0 1840
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21414 SustainPine v3.0 672
AutoFact: Actin, putative n=2 Tax=core eudicotyledons RepID=B9SXZ5_RICCO 0.0
FL-Next: tr=Actin 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin 5.894e-15
N-terminus
sp_v3.0_unigene22332 SustainPine v3.0 1467
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Actin 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin 4.508e-31
C-terminus
sp_v3.0_unigene22714 SustainPine v3.0 608
AutoFact: Actin related protein 2/3 complex n=1 Tax=Dictyostelium fasciculatum RepID=F4QDF7_9MYCE 1.99993e-41
FL-Next: tr=Actinrelated protein 2/3 complex subunit 3 putative; Albugo laibachii Nc14. 0.0
Complete
sp_v3.0_unigene25631 SustainPine v3.0 503
AutoFact: Actin related protein 2/3 complex, subunit 2 n=6 Tax=Clupeocephala RepID=Q6P2T5_DANRE 6.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene26334 SustainPine v3.0 367
AutoFact: actin [Amoeba proteus] 0.0
FL-Next: tr=Actin; Larix gmelinii. 0.0
Sma3: Actin 2.649e-26
N-terminus
sp_v3.0_unigene27263 SustainPine v3.0 1280
AutoFact: Actin-1 n=1 Tax=Glycine max RepID=ACT1_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 8.462e-27
Complete
sp_v3.0_unigene28893 SustainPine v3.0 2323
AutoFact: Altered response to gravity (Arg1), plant, putative n=1 Tax=Ricinus communis RepID=B9S2J6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chaperone protein dnaJ 16 1.575e-08
Complete
sp_v3.0_unigene29170 SustainPine v3.0 681
AutoFact: UDP-glucose:salicylic acid glucosyltransferase [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UDP-glucosyltransferase, putative 2.027e-32
C-terminus
sp_v3.0_unigene31120 SustainPine v3.0 810
AutoFact: actin related protein 2/3 complex, subunit 4, 20kDa [Xenopus (Silurana) tropicalis] ref|NP_001087956.1| actin related protein 2/3 complex, subunit 4, 20kDa [Xenopus laevis] gb|AAH74659.1| actin related protein 2/3 complex, subunit 4, 20kDa [Xenopus (Silur 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene31440 SustainPine v3.0 607
AutoFact: Actin-related protein ARPC3 n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CXS2_LACBS 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene31514 SustainPine v3.0 492
AutoFact: Actin-related protein 3 n=1 Tax=Acanthamoeba castellanii RepID=ARP3_ACACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-related protein 3 2.397e-12
Putative C-terminus
sp_v3.0_unigene31581 SustainPine v3.0 127
AutoFact: Polyubiquitin (Fragment) n=1 Tax=Lemna minor RepID=Q6B444_LEMMI 2.0e-08
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene31748 SustainPine v3.0 567
AutoFact: Actin (Fragment) n=4 Tax=Cercomonas RepID=Q963K0_9EUKA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.38e-21
C-terminus
sp_v3.0_unigene32250 SustainPine v3.0 460
AutoFact: Actin related protein n=1 Tax=Lumbricus rubellus RepID=O46159_LUMRU 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene32746 SustainPine v3.0 450
AutoFact: Ubiquitin n=2 Tax=Suberites domuncula RepID=O96951_SUBDO 5.99756e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S27a 2.678e-06
C-terminus
sp_v3.0_unigene33320 SustainPine v3.0 677
AutoFact: Actin (Fragment) n=4 Tax=Cercomonas RepID=Q963K0_9EUKA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 2.719e-29
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain