Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast

Term: GO:0009507  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2458 SustainPine v3.0 1362
AutoFact: Peroxiredoxin, putative n=1 Tax=Ricinus communis RepID=B9SRG0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peroxiredoxin 1.475e-15
Complete
sp_v3.0_unigene2468 SustainPine v3.0 1593
AutoFact: Phospholipase D (Fragment) n=2 Tax=Vitis vinifera RepID=D7TW92_VITVI 0.0
FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phospholipase D 4.78e-33
C-terminus
sp_v3.0_unigene2476 SustainPine v3.0 3958
AutoFact: beta-galactosidase [Arabidopsis thaliana] gb|AAM10327.1| At3g54435 [Arabidopsis thaliana] gb|AEE79230.1| beta-galactosidase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative beta-galactosidase 2.684e-07
Complete
sp_v3.0_unigene2479 SustainPine v3.0 1177
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Complete
sp_v3.0_unigene2509 SustainPine v3.0 2346
AutoFact: Ankyrin repeat domain protein, putative n=1 Tax=Ricinus communis RepID=B9RF69_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2534 SustainPine v3.0 1151
AutoFact: Mitochondria-localized low molecular weight heat shock protein 23.5 n=4 Tax=Picea RepID=Q40847_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small heat-shock protein 2.041e-18
Complete
sp_v3.0_unigene2536 SustainPine v3.0 994
AutoFact: Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana] emb|CAB75817.1| putative protein [Arabidopsis thaliana] gb|AAK76594.1| unknown protein [Arabidopsis thaliana] gb|AAM44914.1| unknown protein [Arabidopsis thaliana] gb|AAM63861.1| unknown [A 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene2549 SustainPine v3.0 1984
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 2.48e-09
Complete
sp_v3.0_unigene2558 SustainPine v3.0 1859
AutoFact: Cytosolic aldehyde dehydrogenase n=1 Tax=Oryza sativa Japonica Group RepID=Q9LRE9_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Betaine aldehyde dehydrogenase 0.0
Complete
sp_v3.0_unigene2585 SustainPine v3.0 1576
AutoFact: Heat shock protein 70 (Fragment) n=1 Tax=Nicotiana benthamiana RepID=Q6L9F6_NICBE 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 2.778e-38
C-terminus
sp_v3.0_unigene2597 SustainPine v3.0 2830
AutoFact: Chloroplast protein import component Toc159 n=3 Tax=Pisum sativum RepID=Q9LKR1_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein translocase, putative 4.548e-10
Putative Complete
sp_v3.0_unigene2669 SustainPine v3.0 904
AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group] 6.0e-26
FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 0.0
Sma3: Tfiif-alpha, putative 2.447e-09
C-terminus
sp_v3.0_unigene2670 SustainPine v3.0 1287
AutoFact: Transcription Factor IIF, Rap30/Rap74, interaction [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription Factor IIF, Rap30/Rap74, interaction 5.523e-09
Putative Complete
sp_v3.0_unigene2674 SustainPine v3.0 1064
AutoFact: Histone H2B n=2 Tax=Picea sitchensis RepID=A9NZJ5_PICSI 5.00264e-43
FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 1.098e-33
Putative Complete
sp_v3.0_unigene2683 SustainPine v3.0 2843
AutoFact: multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene2684 SustainPine v3.0 2137
AutoFact: beta-D-xylosidase 4 [Arabidopsis thaliana] sp|Q9FLG1.1|BXL4_ARATH RecName: Full=Beta-D-xylosidase 4; Short=AtBXL4; Flags: Precursor dbj|BAB11424.1| beta-xylosidase [Arabidopsis thaliana] gb|AED97922.1| beta-D-xylosidase 4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-xylosidase 1.336e-13
Complete
sp_v3.0_unigene2691 SustainPine v3.0 1804
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RWX1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin ligase 2.908e-15
Complete
sp_v3.0_unigene2702 SustainPine v3.0 500
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene2731 SustainPine v3.0 4263
AutoFact: Chloroplast alpha-glucan water dikinase, putative n=1 Tax=Ricinus communis RepID=B9RXZ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphoglucan, water dikinase, chloroplastic 5.379e-09
Complete
sp_v3.0_unigene2757 SustainPine v3.0 2740
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Genomic DNA, chromosome 5, P1 clone:MQJ2 1.077e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain