Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: large ribosomal subunit

Term: GO:0015934  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene150500 SustainPine v3.0 455
• AutoFact: 60S ribosomal protein L17 n=1 Tax=Dictyostelium discoideum RepID=RL17_DICDI 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
Putative N-terminus
sp_v3.0_unigene150564 SustainPine v3.0 132
• AutoFact: 60S ribosomal protein L17 (Fragment) n=1 Tax=Scenedesmus obliquus RepID=E3SC74_SCEOB 8.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.922e-08
Internal
sp_v3.0_unigene150566 SustainPine v3.0 318
• AutoFact: Ribosomal protein L17 (Fragment) n=1 Tax=Myxine glutinosa RepID=Q86LY9_MYXGL 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.145e-08
C-terminus
sp_v3.0_unigene150673 SustainPine v3.0 153
• AutoFact: putative L24 ribosomal protein [Ipomoea batatas] 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene150682 SustainPine v3.0 429
• AutoFact: 60S ribosomal protein L26, putative n=5 Tax=Trypanosoma brucei RepID=C9ZW97_TRYB9 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 6.311e-11
C-terminus
sp_v3.0_unigene150786 SustainPine v3.0 429
• AutoFact: Putative 60S ribosomal protein RPL17 n=1 Tax=Phoronis muelleri RepID=B2YI36_9BILA 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
C-terminus
sp_v3.0_unigene150880 SustainPine v3.0 336
• AutoFact: 60S ribosomal protein L2, mitochondrial n=1 Tax=Acanthamoeba castellanii RepID=RM02_ACACA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L2 1.974e-40
Putative C-terminus
sp_v3.0_unigene151028 SustainPine v3.0 420
• AutoFact: PREDICTED: similar to ribosomal protein L17 isoform 1 n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E45CC4 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
C-terminus
sp_v3.0_unigene151278 SustainPine v3.0 236
• AutoFact: Os11g0151300 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0IUK5_ORYSJ 6.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 4.555e-11
Internal
sp_v3.0_unigene151361 SustainPine v3.0 143
• AutoFact: 60S ribosomal protein L26 n=2 Tax=Amphidinium carterae RepID=A7YXE9_AMPCA 5.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene151580 SustainPine v3.0 515
• AutoFact: PREDICTED: 60S ribosomal protein L17-like n=1 Tax=Ailuropoda melanoleuca RepID=UPI0001DEC9EA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
N-terminus
sp_v3.0_unigene151634 SustainPine v3.0 384
• AutoFact: 60S ribosomal protein L7 n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2VYA9_PYRTR 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 9.832e-08
C-terminus
sp_v3.0_unigene151784 SustainPine v3.0 307
• AutoFact: 60S ribosomal protein L17 n=5 Tax=Culicidae RepID=RL17_ANOGA 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 9.978e-11
N-terminus
sp_v3.0_unigene151840 SustainPine v3.0 418
• AutoFact: putative ribosomal protein L26e [Diaphorina citri] 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26-1 1.318e-09
C-terminus
sp_v3.0_unigene151916 SustainPine v3.0 369
• AutoFact: 60S ribosomal protein L26-2 n=2 Tax=Arabidopsis RepID=RL262_ARATH 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 5.644e-11
N-terminus
sp_v3.0_unigene151985 SustainPine v3.0 481
• AutoFact: Superoxide dismutase [Cu-Zn] n=1 Tax=Paramecium tetraurelia RepID=A0DNR4_PARTE 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Putative Complete
sp_v3.0_unigene152139 SustainPine v3.0 402
• AutoFact: PREDICTED: 60S ribosomal protein L7 [Apis mellifera] 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7 5.056e-11
Internal
sp_v3.0_unigene152169 SustainPine v3.0 481
• AutoFact: 60S ribosomal protein L13a n=1 Tax=Cyanophora paradoxa RepID=RL13A_CYAPA 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 6.541e-21
C-terminus
sp_v3.0_unigene152249 SustainPine v3.0 513
• AutoFact: Superoxide dismutase [Cu-Zn] n=5 Tax=Oidiodendron maius RepID=B2CBG7_9PEZI 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Complete
sp_v3.0_unigene152506 SustainPine v3.0 433
• AutoFact: Putative 60S ribosomal protein RPL17 n=1 Tax=Phoronis muelleri RepID=B2YI36_9BILA 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain