Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: large ribosomal subunit

Term: GO:0015934  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene76785 SustainPine v3.0 313
• AutoFact: Ribosomal protein L7 (Fragment) n=1 Tax=Lepidochitona cinerea RepID=E3P7E7_9MOLL 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 8.211e-08
Internal
sp_v3.0_unigene77016 SustainPine v3.0 256
• AutoFact: 60S ribosomal protein L7 [Coprinopsis cinerea okayama7#130] gb|EAU88749.1| 60S ribosomal protein L7 [Coprinopsis cinerea okayama7#130] 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 1.206e-07
Internal
sp_v3.0_unigene77291 SustainPine v3.0 312
• AutoFact: 50S ribosomal protein L1 n=1 Tax=Zea mays RepID=B6TB66_MAIZE 6.0e-16
• FL-Next: sp=Ribosomal protein; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
C-terminus
sp_v3.0_unigene78234 SustainPine v3.0 352
• AutoFact: 60S ribosomal protein L17 n=5 Tax=Apocrita RepID=E2ABF3_9HYME 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.379e-08
Putative C-terminus
sp_v3.0_unigene78476 SustainPine v3.0 166
• AutoFact: RecName: Full=60S ribosomal protein L13a emb|CAA71090.1| ribosomal protein L13a [Cyanophora paradoxa] 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 1.612e-08
Internal
sp_v3.0_unigene78565 SustainPine v3.0 251
• AutoFact: Ribosomal protein n=1 Tax=Picea sitchensis RepID=A9P244_PICSI 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L1, chloroplastic 0.0
Internal
sp_v3.0_unigene79624 SustainPine v3.0 357
• AutoFact: 60S ribosomal protein L7 n=1 Tax=Sterkiella histriomuscorum RepID=A7Y480_OXYTR 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 9.674e-08
Internal
sp_v3.0_unigene79661 SustainPine v3.0 313
• AutoFact: 60S ribosomal protein L7, putative n=7 Tax=Eukaryota RepID=C9ZS67_TRYB9 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80115 SustainPine v3.0 252
• AutoFact: 60S ribosomal protein L7 [Coprinopsis cinerea okayama7#130] gb|EAU88749.1| 60S ribosomal protein L7 [Coprinopsis cinerea okayama7#130] 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 1.345e-07
Internal
sp_v3.0_unigene80319 SustainPine v3.0 427
• AutoFact: Ribosomal protein L17 n=2 Tax=Branchiostoma RepID=Q6WN59_BRABE 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.13e-08
C-terminus
sp_v3.0_unigene80765 SustainPine v3.0 286
• AutoFact: Ribosomal petrp-like protein n=2 Tax=asterids RepID=F4YF96_CAMSI 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.699e-08
Putative N-terminus
sp_v3.0_unigene80920 SustainPine v3.0 290
• AutoFact: Ribosomal protein L13a n=2 Tax=Chlamydomonadales RepID=A8IVU0_CHLRE 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 2.222e-20
C-terminus
sp_v3.0_unigene81130 SustainPine v3.0 107
• AutoFact: 60S ribosomal protein L7 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3JXM5_PUCGT 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 8.019e-08
Internal
sp_v3.0_unigene81685 SustainPine v3.0 425
• AutoFact: Superoxide dismutase [Cu-Zn] n=9 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=SODC_CRYGA 3.0e-31
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
N-terminus
sp_v3.0_unigene97986 SustainPine v3.0 441
• AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 1.0e-25
• FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: WUSCHEL-related homeobox 11 1.765e-12
Internal
sp_v3.0_unigene102191 SustainPine v3.0 505
• AutoFact: Ribosomal protein L2 n=1 Tax=Cycas taitungensis RepID=B0BLF2_CYCTA 0.0
• FL-Next: sp=60S ribosomal protein L2, mitochondrial; Oryza sativa subsp. japonica (Rice). Mitochondrion. 0.0
• Sma3: Ribosomal protein L2 7.631e-29
Internal
sp_v3.0_unigene104150 SustainPine v3.0 425
• AutoFact: ribosomal protein L16a [Coprinopsis cinerea okayama7#130] gb|EAU93058.1| ribosomal protein L16a [Coprinopsis cinerea okayama7#130] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 1.725e-20
N-terminus
sp_v3.0_unigene116230 SustainPine v3.0 616
• AutoFact: ribosomal protein [Petunia x hybrida] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene121451 SustainPine v3.0 124
• AutoFact: 60S ribosomal protein L13a n=1 Tax=Acromyrmex echinatior RepID=F4W841_9HYME 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene126291 SustainPine v3.0 424
• AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 6.0e-27
• FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeodomain-related 1.159e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain