Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: large ribosomal subunit

Term: GO:0015934  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene30930 SustainPine v3.0 571
• AutoFact: Putative 60S ribosomal protein RPL26 n=1 Tax=Phoronis muelleri RepID=B2YI44_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 6.311e-11
Complete
sp_v3.0_unigene31296 SustainPine v3.0 1043
• AutoFact: 60S ribosomal protein L26-2 n=2 Tax=Arabidopsis RepID=RL262_ARATH 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene31367 SustainPine v3.0 433
• AutoFact: ribosomal protein L24, putative [Oryza sativa Japonica Group] gb|EAY79967.1| hypothetical protein OsI_35131 [Oryza sativa Indica Group] gb|EAZ17457.1| hypothetical protein OsJ_32984 [Oryza sativa Japonica Group] 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 5.703e-11
C-terminus
sp_v3.0_unigene31423 SustainPine v3.0 638
• AutoFact: Ribosomal protein l17 n=1 Tax=Haliotis discus discus RepID=B1N695_HALDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.536e-10
Complete
sp_v3.0_unigene31680 SustainPine v3.0 410
• AutoFact: 60S ribosomal protein L13A n=1 Tax=Lycosa singoriensis RepID=A9QQ28_LYCSI 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene31738 SustainPine v3.0 637
• AutoFact: ribosomal protein L7 [Branchiostoma lanceolatum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7 4.775e-11
Putative N-terminus
sp_v3.0_unigene31844 SustainPine v3.0 534
• AutoFact: PREDICTED: similar to 60S ribosomal protein L17 (L23) isoform 1 [Canis familiaris] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
Putative Complete
sp_v3.0_unigene31955 SustainPine v3.0 468
• AutoFact: putative L24 ribosomal protein [Ipomoea batatas] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 6.311e-11
Complete
sp_v3.0_unigene31969 SustainPine v3.0 487
• AutoFact: Chain e, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|EE Chain e, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7 3.732e-11
C-terminus
sp_v3.0_unigene31987 SustainPine v3.0 501
• AutoFact: PREDICTED: 60S ribosomal protein L17-like n=1 Tax=Ailuropoda melanoleuca RepID=UPI0001DEC9EA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
C-terminus
sp_v3.0_unigene32822 SustainPine v3.0 1121
• AutoFact: 60S ribosomal protein L13a n=3 Tax=Picea RepID=RL13A_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene32876 SustainPine v3.0 699
• AutoFact: large subunit ribosomal protein L30 [Arabidopsis thaliana] gb|AAM67016.1| unknown [Arabidopsis thaliana] gb|ABD38899.1| At5g55140 [Arabidopsis thaliana] gb|AED96591.1| large subunit ribosomal protein L30 [Arabidopsis thaliana] 9.0e-24
• FL-Next: tr=Ribosomal protein L30 family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Complete
sp_v3.0_unigene33292 SustainPine v3.0 541
• AutoFact: 60S ribosomal protein L17 n=3 Tax=Caenorhabditis RepID=RL17_CAEEL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
Complete
sp_v3.0_unigene33589 SustainPine v3.0 598
• AutoFact: Superoxide dismutase [Cu-Zn] n=3 Tax=Pinaceae RepID=SODC_PINSY 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Putative Complete
sp_v3.0_unigene35495 SustainPine v3.0 560
• AutoFact: ribosomal L.2-like protein [Arabidopsis thaliana] gb|AAL16127.1|AF428295_1 At1g26740/T24P13_11 [Arabidopsis thaliana] gb|AAN18114.1| At1g26740/T24P13_11 [Arabidopsis thaliana] gb|AEE30726.1| ribosomal L.2-like protein [Arabidopsis thaliana] 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
N-terminus
sp_v3.0_unigene35613 SustainPine v3.0 728
• AutoFact: 60S ribosomal protein L26-2 n=2 Tax=Arabidopsis RepID=RL262_ARATH 6.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene35833 SustainPine v3.0 644
• AutoFact: Ribosomal protein rpl17 (Fragment) n=1 Tax=Eurythoe complanata RepID=A8UG49_EURCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.536e-10
C-terminus
sp_v3.0_unigene35903 SustainPine v3.0 465
• AutoFact: 60S ribosomal protein L13a n=1 Tax=Cyanophora paradoxa RepID=RL13A_CYAPA 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 2.632e-20
C-terminus
sp_v3.0_unigene36305 SustainPine v3.0 1182
• AutoFact: ribosomal protein L7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene37089 SustainPine v3.0 1301
• AutoFact: Ribosomal protein L30 n=3 Tax=Medicago truncatula RepID=Q2HVI3_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain