Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: large ribosomal subunit

Term: GO:0015934  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene199793 SustainPine v3.0 362
AutoFact: Ribosomal protein L13 containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q245E7_TETTH 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13a 8.045e-21
Putative N-terminus
sp_v3.0_unigene200145 SustainPine v3.0 465
AutoFact: Ribosomal protein L7 (Fragment) n=2 Tax=Branchiostoma RepID=Q86LY5_BRALA 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L7-2 9.992e-08
N-terminus
sp_v3.0_unigene200375 SustainPine v3.0 412
AutoFact: PREDICTED: similar to ribosomal protein L7e n=1 Tax=Nasonia vitripennis RepID=UPI00015B5B45 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L7-1 7.092e-08
C-terminus
sp_v3.0_unigene200489 SustainPine v3.0 379
AutoFact: Ribosomal protein L7-like n=1 Tax=Ixodes scapularis RepID=Q4PM37_IXOSC 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L7-2 8.802e-08
Putative N-terminus
sp_v3.0_unigene202154 SustainPine v3.0 843
AutoFact: Os01g0739000 protein n=3 Tax=Oryza sativa RepID=Q5JNL6_ORYSJ 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene202437 SustainPine v3.0 1048
AutoFact: Os01g0739000 protein n=3 Tax=Oryza sativa RepID=Q5JNL6_ORYSJ 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene202554 SustainPine v3.0 493
AutoFact: Ribosomal protein L24 n=3 Tax=Perkinsus RepID=A7YXM0_PERCH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L26 6.437e-11
Complete
sp_v3.0_unigene202789 SustainPine v3.0 515
AutoFact: Ribosomal protein L24 n=3 Tax=Perkinsus RepID=A7YXM0_PERCH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L26 6.311e-11
Complete
sp_v3.0_unigene202844 SustainPine v3.0 394
AutoFact: 60S ribosomal protein L17 n=3 Tax=Caenorhabditis RepID=RL17_CAEEL 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L17 1.266e-10
N-terminus
sp_v3.0_unigene203153 SustainPine v3.0 569
AutoFact: 60S ribosomal protein L17 n=1 Tax=Podocoryna carnea RepID=RL17_PODCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L17 1.509e-10
Complete
sp_v3.0_unigene204663 SustainPine v3.0 314
AutoFact: ribosomal protein L17 [Ictalurus punctatus] gb|AAK95143.1|AF401571_1 ribosomal protein L17 [Ictalurus punctatus] 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L17-2 1.855e-08
C-terminus
sp_v3.0_unigene204973 SustainPine v3.0 391
AutoFact: 60S ribosomal protein L7 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WTG6_9STRA 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L7-2 1.005e-07
C-terminus
sp_v3.0_unigene205539 SustainPine v3.0 392
AutoFact: PREDICTED: 60S ribosomal protein L17-like n=1 Tax=Ailuropoda melanoleuca RepID=UPI0001DEC9EA 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L17 1.416e-10
N-terminus
sp_v3.0_unigene205540 SustainPine v3.0 497
AutoFact: Ribosomal protein L13A, putative n=1 Tax=Ixodes scapularis RepID=B7PR90_IXOSC 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13a 5.541e-21
C-terminus
sp_v3.0_unigene205657 SustainPine v3.0 533
AutoFact: Superoxide dismutase [Cu-Zn] n=1 Tax=Branchiostoma floridae RepID=C3ZM91_BRAFL 0.0
FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
Sma3: Superoxide dismutase [Cu-Zn] 0.0
Putative Complete
sp_v3.0_unigene205680 SustainPine v3.0 344
AutoFact: Ribosomal protein L13 n=1 Tax=Uroleptus sp. WJC-2003 RepID=Q2THG7_9SPIT 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene206077 SustainPine v3.0 515
AutoFact: Ribosomal protein L24 n=3 Tax=Perkinsus RepID=A7YXM0_PERCH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L26 6.437e-11
Complete
sp_v3.0_unigene206675 SustainPine v3.0 284
AutoFact: 60S ribosomal protein L13a n=3 Tax=Picea RepID=RL13A_PICMA 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13a 4.788e-21
N-terminus
sp_v3.0_unigene208506 SustainPine v3.0 604
AutoFact: 60S ribosomal protein L26-2 n=2 Tax=Arabidopsis RepID=RL262_ARATH 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene208688 SustainPine v3.0 376
AutoFact: Superoxide dismutase [Cu-Zn] n=2 Tax=Pinus sylvestris RepID=Q9AR80_PINSY 1.0e-22
FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
Sma3: Superoxide dismutase [Cu-Zn] 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain