Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L22/L17

Term: IPR001063  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene67625 SustainPine v3.0 252
• AutoFact: 50S ribosomal protein L22-like n=2 Tax=Oryza sativa RepID=Q5ZDK4_ORYSJ 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene76324 SustainPine v3.0 203
• AutoFact: Putative 60S ribosomal protein RPL17 (Fragment) n=1 Tax=Flustra foliacea RepID=A9UDS6_9BILA 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.165e-08
Internal
sp_v3.0_unigene78234 SustainPine v3.0 352
• AutoFact: 60S ribosomal protein L17 n=5 Tax=Apocrita RepID=E2ABF3_9HYME 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.379e-08
Putative C-terminus
sp_v3.0_unigene80319 SustainPine v3.0 427
• AutoFact: Ribosomal protein L17 n=2 Tax=Branchiostoma RepID=Q6WN59_BRABE 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.13e-08
C-terminus
sp_v3.0_unigene80765 SustainPine v3.0 286
• AutoFact: Ribosomal petrp-like protein n=2 Tax=asterids RepID=F4YF96_CAMSI 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.699e-08
Putative N-terminus
sp_v3.0_unigene105399 SustainPine v3.0 418
• AutoFact: peptidase 3.0e-32
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene116230 SustainPine v3.0 616
• AutoFact: ribosomal protein [Petunia x hybrida] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene144778 SustainPine v3.0 602
• AutoFact: ribosomal protein L17-1 [Poa secunda] 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S29 2.935e-20
Complete
sp_v3.0_unigene145010 SustainPine v3.0 389
• AutoFact: ribosomal protein L17-1 [Poa secunda] 2.0e-28
• FL-Next: sp=60S ribosomal protein L17-2; Hordeum vulgare (Barley). 0.0
• Sma3: 60S ribosomal protein L17-2 2.145e-08
C-terminus
sp_v3.0_unigene145207 SustainPine v3.0 523
• AutoFact: Ribosomal petrp-like protein n=2 Tax=asterids RepID=F4YF96_CAMSI 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.159e-08
Misassembled
sp_v3.0_unigene150221 SustainPine v3.0 473
• AutoFact: 60S ribosomal protein L17-2 n=1 Tax=Phytophthora infestans T30-4 RepID=D0N014_PHYIT 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.074e-08
C-terminus
sp_v3.0_unigene150500 SustainPine v3.0 455
• AutoFact: 60S ribosomal protein L17 n=1 Tax=Dictyostelium discoideum RepID=RL17_DICDI 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
Putative N-terminus
sp_v3.0_unigene150564 SustainPine v3.0 132
• AutoFact: 60S ribosomal protein L17 (Fragment) n=1 Tax=Scenedesmus obliquus RepID=E3SC74_SCEOB 8.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.922e-08
Internal
sp_v3.0_unigene150566 SustainPine v3.0 318
• AutoFact: Ribosomal protein L17 (Fragment) n=1 Tax=Myxine glutinosa RepID=Q86LY9_MYXGL 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.145e-08
C-terminus
sp_v3.0_unigene150786 SustainPine v3.0 429
• AutoFact: Putative 60S ribosomal protein RPL17 n=1 Tax=Phoronis muelleri RepID=B2YI36_9BILA 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
C-terminus
sp_v3.0_unigene151028 SustainPine v3.0 420
• AutoFact: PREDICTED: similar to ribosomal protein L17 isoform 1 n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E45CC4 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
C-terminus
sp_v3.0_unigene151580 SustainPine v3.0 515
• AutoFact: PREDICTED: 60S ribosomal protein L17-like n=1 Tax=Ailuropoda melanoleuca RepID=UPI0001DEC9EA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
N-terminus
sp_v3.0_unigene151784 SustainPine v3.0 307
• AutoFact: 60S ribosomal protein L17 n=5 Tax=Culicidae RepID=RL17_ANOGA 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 9.978e-11
N-terminus
sp_v3.0_unigene152506 SustainPine v3.0 433
• AutoFact: Putative 60S ribosomal protein RPL17 n=1 Tax=Phoronis muelleri RepID=B2YI36_9BILA 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
C-terminus
sp_v3.0_unigene153174 SustainPine v3.0 425
• AutoFact: ribosomal protein L17 [Ictalurus punctatus] gb|AAK95143.1|AF401571_1 ribosomal protein L17 [Ictalurus punctatus] 7.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain