Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Root cap

Term: IPR009646  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene734 SustainPine v3.0 1494
AutoFact: Root_cap domain containing protein 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Structural constituent of cell wall, putative 1.901e-18
Putative Complete
sp_v3.0_unigene1879 SustainPine v3.0 3620
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TEH2_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin 3.825e-13
Complete
sp_v3.0_unigene2216 SustainPine v3.0 1297
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 0.0
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Late embryogenesis abundant protein 0.0
Complete
sp_v3.0_unigene2409 SustainPine v3.0 1114
AutoFact: Drf_FH1 multi-domain protein 2.0e-18
Sma3: Extensin 3.312e-31
coding
sp_v3.0_unigene2421 SustainPine v3.0 1461
AutoFact: Structural constituent of cell wall, putative n=1 Tax=Ricinus communis RepID=B9SWC5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Structural constituent of cell wall, putative 3.481e-18
Complete
sp_v3.0_unigene2733 SustainPine v3.0 1676
AutoFact: Late embryogenesis abundant-like protein (Fragment) n=19 Tax=Picea sitchensis RepID=E0ZAL6_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3321 SustainPine v3.0 605
AutoFact: FAP multi-domain protein 5.0e-20
Sma3: Glycine-rich protein 5.632e-13
coding
sp_v3.0_unigene3607 SustainPine v3.0 878
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 0.0
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Structural constituent of cell wall, putative 1.479e-17
C-terminus
sp_v3.0_unigene5154 SustainPine v3.0 377
AutoFact: Drf_FH1 multi-domain protein 8.0e-19
Sma3: Extensin 7.246e-34
coding
sp_v3.0_unigene6600 SustainPine v3.0 2097
AutoFact: proteinaceous RNase P 1 [Arabidopsis thaliana] sp|Q66GI4.1|PP179_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Flags: Precursor gb|AAU05541.1| At2g32230 [Arabidopsis thaliana] gb|AEC08652.1| proteinaceous RNase 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Multidrug resistance pump, putative 1.092e-08
C-terminus
sp_v3.0_unigene9106 SustainPine v3.0 1480
AutoFact: Root_cap domain containing protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Structural constituent of cell wall, putative 2.266e-18
Complete
sp_v3.0_unigene9877 SustainPine v3.0 844
AutoFact: Extensin_2 multi-domain protein 4.0e-24
Sma3: Extensin 0.0
coding
sp_v3.0_unigene16995 SustainPine v3.0 2025
AutoFact: Atrophin-1 multi-domain protein 6.0e-39
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Extensin 6.007e-36
C-terminus
sp_v3.0_unigene17301 SustainPine v3.0 1416
AutoFact: DUF1421 multi-domain protein 2.0e-15
Sma3: Repetitive proline-rich cell wall protein 1 8.439e-09
putative_coding
sp_v3.0_unigene17400 SustainPine v3.0 1219
AutoFact: Atrophin-1 multi-domain protein 1.0e-18
Sma3: Extensin 1.784e-30
coding
sp_v3.0_unigene17545 SustainPine v3.0 1605
AutoFact: Root cap; Antihaemostatic protein n=1 Tax=Medicago truncatula RepID=A2Q250_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Similarity to root cap protein 7.315e-09
Complete
sp_v3.0_unigene17666 SustainPine v3.0 880
AutoFact: Drf_FH1 multi-domain protein 9.0e-21
Sma3: Extensin 2.055e-36
coding
sp_v3.0_unigene18131 SustainPine v3.0 1193
AutoFact: Drf_FH1 multi-domain protein 3.0e-19
Sma3: Extensin 5.115e-18
coding
sp_v3.0_unigene21347 SustainPine v3.0 1465
AutoFact: DUF1421 multi-domain protein 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin 3.432e-30
Complete
sp_v3.0_unigene21364 SustainPine v3.0 1289
AutoFact: Atrophin-1 multi-domain protein 1.0e-28
Sma3: Glycine-rich protein 1.328e-12
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain