Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Root cap

Term: IPR009646  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene202180 SustainPine v3.0 646
AutoFact: late embryogenesis abundant protein-like protein [Arabidopsis thaliana] dbj|BAB10109.1| root cap protein 2-like protein [Arabidopsis thaliana] gb|AAZ23915.1| At5g54370 [Arabidopsis thaliana] gb|AED96489.1| late embryogenesis abundant protein-like protein 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Structural constituent of cell wall, putative 4.625e-15
C-terminus
sp_v3.0_unigene204320 SustainPine v3.0 207
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 2.0e-13
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
N-terminus
sp_v3.0_unigene205626 SustainPine v3.0 233
AutoFact: Extensin_2 multi-domain protein 8.0e-25
Sma3: Extensin 0.0
coding
sp_v3.0_unigene205735 SustainPine v3.0 934
AutoFact: Drf_FH1 multi-domain protein 1.0e-20
Sma3: Extensin 4.05e-33
coding
sp_v3.0_unigene206706 SustainPine v3.0 608
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 9.99995e-41
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Structural constituent of cell wall, putative 1.76e-07
C-terminus
sp_v3.0_unigene206952 SustainPine v3.0 239
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 7.0e-31
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Structural constituent of cell wall, putative 8.273e-12
Internal
sp_v3.0_unigene206969 SustainPine v3.0 599
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 2.94273e-44
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Structural constituent of cell wall, putative 1.961e-11
C-terminus
sp_v3.0_unigene209809 SustainPine v3.0 388
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 3.0e-38
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
C-terminus
sp_v3.0_unigene209842 SustainPine v3.0 756
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_3192, whole genome shotgun sequence 5.848e-06
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain