Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Aminoacyl-tRNA synthetase, class Ic

Term: IPR002305  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene151237 SustainPine v3.0 437
AutoFact: Tryptophanyl-tRNA synthetase n=1 Tax=Polysphondylium pallidum RepID=D3B072_POLPA 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: tRNA synthetase 3.37e-08
Putative C-terminus
sp_v3.0_unigene153707 SustainPine v3.0 398
AutoFact: tryptophanyl-tRNA synthetase family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CBA7C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tryptophanyl-tRNA synthetase 1.093e-08
Internal
sp_v3.0_unigene155248 SustainPine v3.0 390
AutoFact: tyrosine-tRNA ligase [Dictyostelium discoideum AX4] gb|EAL69118.1| tyrosine-tRNA ligase [Dictyostelium discoideum AX4] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative tyrosyl-tRNA synthetase 1.183e-11
Putative C-terminus
sp_v3.0_unigene158420 SustainPine v3.0 404
AutoFact: PREDICTED: similar to Tryptophanyl-tRNA synthetase, cytoplasmic (Tryptophan--tRNA ligase) (TrpRS) (Interferon-induced protein 53) (IFP53) (hWRS) [Tribolium castaneum] gb|EFA07367.1| hypothetical protein TcasGA2_TC016342 [Tribolium castaneum] 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: tRNA synthetase 2.613e-08
C-terminus
sp_v3.0_unigene158667 SustainPine v3.0 147
AutoFact: Tyrosine--tRNA ligase n=1 Tax=Ectocarpus siliculosus RepID=D7FQL3_ECTSI 9.0e-18
FL-Next: tr=Tyrosine--tRNA ligase; Ectocarpus siliculosus (Brown alga). 0.0
Sma3: Tyrosyl-tRNA synthetase 2.047e-08
Internal
sp_v3.0_unigene160264 SustainPine v3.0 375
AutoFact: tyrS tyrosyl-tRNA synthetase [Arabidopsis thaliana] gb|AAF32473.1| putative tyrosyl-tRNA synthetase [Arabidopsis thaliana] dbj|BAD95182.1| putative tyrosyl-tRNA synthetase [Arabidopsis thaliana] gb|ABK32110.1| At3g02660 [Arabidopsis thaliana] gb|AEE73845. 1.0e-11
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
C-terminus
sp_v3.0_unigene160941 SustainPine v3.0 335
AutoFact: rve domain containing protein 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 5.231e-13
Putative Complete
sp_v3.0_unigene163066 SustainPine v3.0 259
AutoFact: pfam00078, RVT_1, Reverse transcriptase (RNA-dependent DNA polymerase) 3.0e-17
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
C-terminus
sp_v3.0_unigene163541 SustainPine v3.0 187
AutoFact: Gag-pol polyprotein n=3 Tax=Zea mays RepID=Q8L7J3_MAIZE 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 4.454e-14
Putative C-terminus
sp_v3.0_unigene163701 SustainPine v3.0 305
AutoFact: Tryptophanyl-tRNA synthetase [Danio rerio] 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tryptophanyl-tRNA synthetase, putative, expressed 2.836e-08
Internal
sp_v3.0_unigene183159 SustainPine v3.0 782
AutoFact: Tryptophanyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RS09_RICCO 1.0e-23
FL-Next: tr=Tryptophanyl-tRNA synthetase, putative; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene189889 SustainPine v3.0 495
AutoFact: RVT_1 domain containing protein 2.0e-15
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.173e-15
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain