Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene7239 SustainPine v3.0 1800
• AutoFact: GC-rich sequence DNA-binding factor [Arabidopsis thaliana] dbj|BAB10004.1| unnamed protein product [Arabidopsis thaliana] dbj|BAF36503.1| transcriptional repressor ILP1 [Arabidopsis thaliana] gb|AED91319.1| GC-rich sequence DNA-binding factor [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene7293 SustainPine v3.0 1794
• AutoFact: DUF3598 domain containing protein 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Complete
sp_v3.0_unigene7322 SustainPine v3.0 941
• AutoFact: Class III HD-Zip protein HDZ35 (Fragment) n=1 Tax=Pinus taeda RepID=Q0Q417_PINTA 0.0
• FL-Next: tr=Class III homeodomain leucine zipper protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 1.149e-14
C-terminus
sp_v3.0_unigene7503 SustainPine v3.0 1810
• AutoFact: DELLA domain GRAS family transcription factor rga-like protein n=2 Tax=Populus trichocarpa RepID=B9GV61_POPTR 0.0
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Sma3: DELLA protein 1.13505e-43
C-terminus
sp_v3.0_unigene7546 SustainPine v3.0 1684
• AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gb|AAM13041.1| unknown protein [Arabidopsis thaliana] gb|AAO30091.1| unknown protein [Arabidopsis thaliana] gb|AEE76088.1| sequence-specific DNA binding transcription factor [Arabid 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene7577 SustainPine v3.0 1816
• AutoFact: heat shock factor protein hsf8-related [Glycine max] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Heat shock factor protein, putative 5.003e-15
Complete
sp_v3.0_unigene7583 SustainPine v3.0 1150
• AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 8.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative histone deacetylase complex, SIN3 component 5.66e-16
Putative Complete
sp_v3.0_unigene7584 SustainPine v3.0 2106
• AutoFact: ZF-HD homeobox protein [Flaveria bidentis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger homeodomain protein 1 1.043e-20
Complete
sp_v3.0_unigene7585 SustainPine v3.0 1402
• AutoFact: Drought responsive element binding protein 2 n=3 Tax=Glycine max RepID=C5IU97_SOYBN 1.0e-30
• FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Putative C-terminus
sp_v3.0_unigene7620 SustainPine v3.0 1691
• AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 2.422e-13
Complete
sp_v3.0_unigene7651 SustainPine v3.0 1243
• AutoFact: putative AP2 domain transcription factor [Arabidopsis thaliana] 1.0e-30
• FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: AP2 domain-containing transcription factor 4.673e-15
Putative C-terminus
sp_v3.0_unigene7737 SustainPine v3.0 1443
• AutoFact: Nudix hydrolase 13 n=3 Tax=Andropogoneae RepID=B6SQG1_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Diphosphoinositol polyphosphate phosphohydrolase, putative 2.356e-19
Complete
sp_v3.0_unigene7763 SustainPine v3.0 649
• AutoFact: Oligopeptide transporter, putative n=1 Tax=Ricinus communis RepID=B9S740_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 4.733e-26
Internal
sp_v3.0_unigene7784 SustainPine v3.0 1703
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TRANSPARENT TESTA 1 protein, putative 5.196e-19
Complete
sp_v3.0_unigene7799 SustainPine v3.0 1391
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RYX9_RICCO 8.40779e-45
• FL-Next: sp=B3 domain-containing protein Os03g0120900; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: AP2 domain-containing transcription factor 3.908e-10
Complete
sp_v3.0_unigene7843 SustainPine v3.0 3324
• AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 3.39801e-41
Putative C-terminus
sp_v3.0_unigene7851 SustainPine v3.0 2315
• AutoFact: Ethylene-insensitive 3-like 1 protein n=1 Tax=Citrus sinensis RepID=D7PVG7_CITSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ethylene signal transcription factor 1.74e-11
Putative Complete
sp_v3.0_unigene7865 SustainPine v3.0 2209
• AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene7956 SustainPine v3.0 1950
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TAE9_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Squamosa promoter-binding protein, putative 1.922e-12
Complete
sp_v3.0_unigene7972 SustainPine v3.0 2566
• AutoFact: pfam05920, Homeobox_KN, Homeobox KN domain 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Class 1 knox protein 8.58e-15
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain