Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene194378 SustainPine v3.0 439
AutoFact: BEL1-related homeotic protein 30 [Solanum tuberosum] 2.0e-40
FL-Next: sp=BEL1-like homeodomain protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bel1 homeotic protein, putative 7.773e-28
Internal
sp_v3.0_unigene194812 SustainPine v3.0 241
AutoFact: GAGA-motif binding transcriptional activator n=2 Tax=Populus trichocarpa RepID=A8D1A0_POPTR 3.0e-18
FL-Next: tr=GAGA-binding transcriptional activator; Pinus taeda (Loblolly pine). 0.0
Sma3: GAGA-binding transcriptional activator 1.32e-28
Internal
sp_v3.0_unigene195195 SustainPine v3.0 533
AutoFact: Chromatin remodeling 38 n=5 Tax=Camelineae RepID=Q9M297_ARATH 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 3.305e-08
Putative C-terminus
sp_v3.0_unigene195356 SustainPine v3.0 306
AutoFact: Ethylene responsive transcription factor 1a n=1 Tax=Prunus salicina RepID=C0J9I9_9ROSA 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.56385e-42
Internal
sp_v3.0_unigene195596 SustainPine v3.0 187
AutoFact: cytochrome P450 [Pyrus communis] 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome P450 3.205e-15
Internal
sp_v3.0_unigene196190 SustainPine v3.0 266
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SJT2_ARATH 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.862e-16
Internal
sp_v3.0_unigene196697 SustainPine v3.0 412
AutoFact: WRKY transcription factor 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZJ7_PICAB 9.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WRKY transcription factor 5 2.401e-07
Internal
sp_v3.0_unigene196894 SustainPine v3.0 554
AutoFact: MADS-box transcription factor FBP22 n=1 Tax=Petunia x hybrida RepID=Q9ATE7_PETHY 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AGAMOUS-like protein 1.154e-24
N-terminus
sp_v3.0_unigene197186 SustainPine v3.0 261
AutoFact: putative AP2 domain transcription factor [Arabidopsis thaliana] 2.0e-24
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 4.217e-12
Internal
sp_v3.0_unigene198271 SustainPine v3.0 399
AutoFact: Unassigned protein 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene199189 SustainPine v3.0 579
AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 6.243e-09
Putative Complete
sp_v3.0_unigene199445 SustainPine v3.0 526
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.465e-26
Internal
sp_v3.0_unigene199517 SustainPine v3.0 450
AutoFact: PREDICTED: ripening-related bZIP protein-like isoform 2 [Vitis vinifera] ref|XP_002284785.1| PREDICTED: ripening-related bZIP protein-like isoform 1 [Vitis vinifera] emb|CAB85632.1| putative ripening-related bZIP protein [Vitis vinifera] 1.0e-21
FL-Next: sp=ABSCISIC ACID-INSENSITIVE 5-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: BZIP transcription factor ABI5 6.972e-12
Internal
sp_v3.0_unigene199853 SustainPine v3.0 445
AutoFact: Transcription factor, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MTK5_PHYIT 2.0e-30
FL-Next: tr=E2F-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Transcription factor E2F 1.233e-29
N-terminus
sp_v3.0_unigene200893 SustainPine v3.0 457
AutoFact: AP2 domain transcription factor RAP2 n=1 Tax=Cucumis melo subsp. melo RepID=E5GB56_CUCME 8.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 6.005e-38
Internal
sp_v3.0_unigene201124 SustainPine v3.0 298
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q7XFT0_ORYSJ 5.0e-24
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 0.0
Putative C-terminus
sp_v3.0_unigene201160 SustainPine v3.0 424
AutoFact: Kinesin-like protein n=3 Tax=Arabidopsis thaliana RepID=Q9FME7_ARATH 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinesin-like protein 1.616e-30
Internal
sp_v3.0_unigene201885 SustainPine v3.0 819
AutoFact: Ras-related protein Rab-18 [Arabidopsis thaliana] ref|NP_001077675.1| Ras-related protein Rab-18 [Arabidopsis thaliana] ref|NP_001117435.1| Ras-related protein Rab-18 [Arabidopsis thaliana] sp|O23657.1|RABC1_ARATH RecName: Full=Ras-related protein RABC1; 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab18/RabC-family small GTPase 1.124e-19
Putative Complete
sp_v3.0_unigene201923 SustainPine v3.0 885
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.093e-28
Internal
sp_v3.0_unigene201925 SustainPine v3.0 931
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain