Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene50154 SustainPine v3.0 300
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.954e-13
Internal
sp_v3.0_unigene50255 SustainPine v3.0 1848
• AutoFact: GAGA-binding transcriptional activator BBR/BPC6-like n=1 Tax=Vitis vinifera RepID=B2Z458_VITVI 0.0
• FL-Next: tr=GAGA-binding transcriptional activator; Pinus taeda (Loblolly pine). 0.0
• Sma3: GAGA-binding transcriptional activator 3.309e-33
Complete
sp_v3.0_unigene50522 SustainPine v3.0 312
• AutoFact: Type-B response regulator n=1 Tax=Catharanthus roseus RepID=Q71BZ1_CATRO 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-b response regulator 2.323e-30
Internal
sp_v3.0_unigene50696 SustainPine v3.0 222
• AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gb|AEE76089.1| sequence-specific DNA binding transcription factor [Arabidopsis thaliana] 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene50903 SustainPine v3.0 1202
• AutoFact: Transcription factor HBP-1b(C1), putative n=1 Tax=Ricinus communis RepID=B9RG75_RICCO 0.0
• FL-Next: sp=TGACG-sequence-specific DNA-binding protein TGA-2.1; Nicotiana tabacum (Common tobacco). 0.0
• Sma3: BZIP transcription factor 2.822e-19
C-terminus
sp_v3.0_unigene51091 SustainPine v3.0 131
• AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 3.0e-07
• FL-Next: sp=Transcription factor bHLH66; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: BHLH transcription factor 1.78e-20
Internal
sp_v3.0_unigene51346 SustainPine v3.0 195
• AutoFact: Unassigned protein 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene51419 SustainPine v3.0 614
• AutoFact: MIKCC MADS-domain protein PPMC6 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TDM3_PHYPA 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS box protein 2.189e-15
Complete
sp_v3.0_unigene51453 SustainPine v3.0 423
• AutoFact: putative TCP transcription factor [Solanum tuberosum] 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TCP-domain protein 9.085e-14
Internal
sp_v3.0_unigene51477 SustainPine v3.0 384
• AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 4.626e-32
Putative N-terminus
sp_v3.0_unigene51565 SustainPine v3.0 3449
• AutoFact: Class III homeodomain leucine zipper protein n=18 Tax=Spermatophyta RepID=E7DX24_PICGL 0.0
• FL-Next: tr=Class III HD-Zip protein HDZ31; Pinus taeda (Loblolly pine). 0.0
• Sma3: Class III homeodomain-leucine zipper 3.376e-20
Internal
sp_v3.0_unigene51594 SustainPine v3.0 515
• AutoFact: Class III homeodomain leucine zipper protein n=2 Tax=Pinaceae RepID=E7DX27_PICGL 0.0
• FL-Next: tr=Class III homeodomain leucine zipper protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 1.881e-33
Internal
sp_v3.0_unigene51673 SustainPine v3.0 306
• AutoFact: Unassigned protein 3.0e-30
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.471e-10
Internal
sp_v3.0_unigene51795 SustainPine v3.0 405
• AutoFact: Unassigned protein 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene52018 SustainPine v3.0 503
• AutoFact: WRKY transcription factor PmWRKY108 (Fragment) n=2 Tax=Pinus monticola RepID=E6Y3E0_PINMO 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene52106 SustainPine v3.0 287
• AutoFact: ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TV53_PHYPA 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ABC(ABCB) family transporter: mitochondrial ATM1-like protein (ABCB) 1.902e-09
Internal
sp_v3.0_unigene52110 SustainPine v3.0 253
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene52262 SustainPine v3.0 462
• AutoFact: ethylene-responsive transcription factor ERF084 [Arabidopsis thaliana] sp|Q9M8M5.1|ERF84_ARATH RecName: Full=Ethylene-responsive transcription factor ERF084 gb|AAF27133.1|AC018849_21 unknown protein; 25072-24302 [Arabidopsis thaliana] gb|AAT44911.1| putat 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 2.02894e-41
N-terminus
sp_v3.0_unigene52276 SustainPine v3.0 435
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Fragaria x ananassa RepID=C6GFP7_FRAAN 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.411e-16
Internal
sp_v3.0_unigene52327 SustainPine v3.0 373
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain