Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene41217 SustainPine v3.0 3576
AutoFact: auxin response factor-like protein [Mangifera indica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 4.904e-28
Complete
sp_v3.0_unigene41289 SustainPine v3.0 360
AutoFact: Unassigned protein 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene41320 SustainPine v3.0 123
AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX15; AltName: Full=HD-ZIP protein HOX15; AltName: Full=Homeodomain transcription factor HOX15; AltName: Full=OsHox15 gb|AAL91609.1|AC099400_15 Putative homeobox protein HAT22 [Oryza sativa Japonica Group] gb 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox-leucine zipper protein ATHB-4 1.206e-16
Internal
sp_v3.0_unigene41395 SustainPine v3.0 186
AutoFact: Carboxy-terminal kinesin, putative n=1 Tax=Ricinus communis RepID=B9RRL2_RICCO 2.0e-24
FL-Next: sp=Kinesin-like protein FLA10; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Sma3: Phragmoplast-associated kinesin-related protein 1 5.438e-08
Internal
sp_v3.0_unigene42288 SustainPine v3.0 1694
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.022e-14
Putative N-terminus
sp_v3.0_unigene42290 SustainPine v3.0 2773
AutoFact: rve domain containing protein 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.331e-16
Putative Complete
sp_v3.0_unigene42348 SustainPine v3.0 940
AutoFact: DUF296 domain containing protein 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 3.543e-29
N-terminus
sp_v3.0_unigene42681 SustainPine v3.0 874
AutoFact: Heat stress transcription factor A-2c n=3 Tax=Oryza sativa RepID=HFA2C_ORYSJ 9.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene42837 SustainPine v3.0 200
AutoFact: Kinesin, putative n=1 Tax=Ricinus communis RepID=B9SS38_RICCO 6.0e-27
FL-Next: sp=Kinesin-like protein FLA10; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Sma3: Kinesin-like protein 3.137e-22
Internal
sp_v3.0_unigene43038 SustainPine v3.0 923
AutoFact: GATA-type zinc finger transcription factor-like n=2 Tax=Oryza sativa RepID=Q8LR32_ORYSJ 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA transcription factor 19 6.505e-09
C-terminus
sp_v3.0_unigene43331 SustainPine v3.0 245
AutoFact: EIN3-like transcription factor [Rosa hybrid cultivar] 3.0e-28
FL-Next: sp=Protein ETHYLENE INSENSITIVE 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ethylene signal transcription factor 1.352e-15
Internal
sp_v3.0_unigene43565 SustainPine v3.0 137
AutoFact: putative helicase [Arabidopsis thaliana] 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene44120 SustainPine v3.0 232
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 5.0e-27
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 6.086e-11
Internal
sp_v3.0_unigene44160 SustainPine v3.0 490
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRG8_RICCO 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock factor protein HSF30 1.459e-11
Internal
sp_v3.0_unigene44288 SustainPine v3.0 476
AutoFact: NAC transcription factor [Hordeum vulgare subsp. vulgare] 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Internal
sp_v3.0_unigene44407 SustainPine v3.0 542
AutoFact: ETHYLENE-INSENSITIVE3 protein, putative n=1 Tax=Ricinus communis RepID=B9RI80_RICCO 0.0
FL-Next: sp=ETHYLENE INSENSITIVE 3-like 3 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ethylene signal transcription factor 1.437e-15
N-terminus
sp_v3.0_unigene44422 SustainPine v3.0 830
AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gb|AAM13041.1| unknown protein [Arabidopsis thaliana] gb|AAO30091.1| unknown protein [Arabidopsis thaliana] gb|AEE76088.1| sequence-specific DNA binding transcription factor [Arabid 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene44449 SustainPine v3.0 520
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CarD-like transcriptional regulator family protein, expressed 8.439e-09
Putative N-terminus
sp_v3.0_unigene44472 SustainPine v3.0 2077
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene44820 SustainPine v3.0 907
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 3.055e-19
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain