Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene13672 SustainPine v3.0 2328
• AutoFact: Type B response regulator n=2 Tax=Selaginella moellendorffii RepID=D8SC74_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-b response regulator 5.707e-28
Complete
sp_v3.0_unigene13714 SustainPine v3.0 1007
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA3_POPTR 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 6.145e-39
Complete
sp_v3.0_unigene13790 SustainPine v3.0 935
• AutoFact: DNA binding protein Rav [Capsicum annuum] 1.0e-35
• FL-Next: tr=APETALA2-related transcription factor 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Putative AP2 domain containing protein RAP2.8 8.198e-08
Internal
sp_v3.0_unigene13899 SustainPine v3.0 545
• AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9T755_RICCO 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptide transporter 2.007e-18
N-terminus
sp_v3.0_unigene13963 SustainPine v3.0 1166
• AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 3.37601e-41
Misassembled
sp_v3.0_unigene14027 SustainPine v3.0 1001
• AutoFact: Nuclear transcription factor, X-box binding, putative n=1 Tax=Ricinus communis RepID=B9T565_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene14076 SustainPine v3.0 1403
• AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RR65_RICCO 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 4.869e-15
Complete
sp_v3.0_unigene14123 SustainPine v3.0 1838
• AutoFact: NAM-like protein [Prunus persica] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Putative Complete
sp_v3.0_unigene14158 SustainPine v3.0 914
• AutoFact: VQ motif-containing protein [Arabidopsis thaliana] gb|AAV97789.1| At1g28280 [Arabidopsis thaliana] gb|AAW38978.1| At1g28280 [Arabidopsis thaliana] gb|AEE30940.1| VQ motif-containing protein [Arabidopsis thaliana] 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: DNA-binding WRKY 1.195e-11
C-terminus
sp_v3.0_unigene14173 SustainPine v3.0 714
• AutoFact: NO APICAL MERISTEM2 n=2 Tax=Pisum sativum RepID=B8XS03_PEA 0.0
• FL-Next: tr=Cup-shaped cotyledon; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene14220 SustainPine v3.0 903
• AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene14340 SustainPine v3.0 1089
• AutoFact: DUF679 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene14440 SustainPine v3.0 1152
• AutoFact: Os03g0758000 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q9AUV7_ORYSJ 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 3.366e-13
C-terminus
sp_v3.0_unigene14450 SustainPine v3.0 476
• AutoFact: WRKY transcription factor PmWRKY117 (Fragment) n=1 Tax=Pinus monticola RepID=E6Y3E9_PINMO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor WRKY16 4.873e-06
Internal
sp_v3.0_unigene14507 SustainPine v3.0 785
• AutoFact: ethylene-responsive transcription factor ERF016 [Arabidopsis thaliana] sp|Q9C591.1|ERF16_ARATH RecName: Full=Ethylene-responsive transcription factor ERF016 emb|CAC34489.1| putative protein [Arabidopsis thaliana] gb|AAO73898.1| AP2 domain transcription fa 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 4.406e-18
Complete
sp_v3.0_unigene14685 SustainPine v3.0 3179
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCK4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Loricrin-like 1.861e-12
Complete
sp_v3.0_unigene14775 SustainPine v3.0 575
• AutoFact: Unassigned protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene14863 SustainPine v3.0 1062
• AutoFact: Short-root n=1 Tax=Pinus radiata RepID=B4XI11_PINRA 0.0
• FL-Next: tr=Short-root; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Putative SHORT-ROOT protein 3.223e-09
C-terminus
sp_v3.0_unigene14886 SustainPine v3.0 267
• AutoFact: R2R3-MYB transcriptional factor n=1 Tax=Gentiana triflora RepID=A9ZMI4_GENTR 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Typical P-type R2R3 Myb protein 1.762e-14
Internal
sp_v3.0_unigene14928 SustainPine v3.0 314
• AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 2.94273e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 1.159e-27
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain