Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene12617 SustainPine v3.0 896
• AutoFact: putative helicase [Arabidopsis thaliana] 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CarD-like transcriptional regulator family protein, expressed 4.361e-09
Complete
sp_v3.0_unigene12628 SustainPine v3.0 456
• AutoFact: APETALA2-like protein 1 n=1 Tax=Pinus thunbergii RepID=Q76H95_PINTH 0.0
• FL-Next: tr=APETALA2-like protein 1; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: AP2 domain-containing transcription factor 2.741e-32
Internal
sp_v3.0_unigene12641 SustainPine v3.0 1026
• AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12647 SustainPine v3.0 1792
• AutoFact: Response_reg multi-domain protein 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-b response regulator 2.708e-09
Complete
sp_v3.0_unigene12665 SustainPine v3.0 1014
• AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 1.749e-25
Complete
sp_v3.0_unigene12697 SustainPine v3.0 956
• AutoFact: sigma factor [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid RNA polymerase sigma factor 2.532e-11
Internal
sp_v3.0_unigene12747 SustainPine v3.0 1041
• AutoFact: serine hydroxymethyltransferase 7 [Arabidopsis thaliana] gb|AAO22567.1| putative hydroxymethyltransferase [Arabidopsis thaliana] gb|AEE31862.1| serine hydroxymethyltransferase 7 [Arabidopsis thaliana] 1.0e-33
• FL-Next: sp=Serine hydroxymethyltransferase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
N-terminus
sp_v3.0_unigene12768 SustainPine v3.0 529
• AutoFact: pfam06217, GAGA_bind, GAGA binding protein-like family 0.0
• FL-Next: tr=GAGA-binding transcriptional activator; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GAGA-binding transcriptional activator 4.2039e-45
C-terminus
sp_v3.0_unigene12776 SustainPine v3.0 733
• AutoFact: Homeobox-leucine zipper protein HOX19 n=3 Tax=Oryza sativa RepID=HOX19_ORYSJ 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 6.606e-08
C-terminus
sp_v3.0_unigene12823 SustainPine v3.0 2180
• AutoFact: WRKY transcription factor 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZJ7_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene12893 SustainPine v3.0 1181
• AutoFact: MADS-box transcription factor 18 n=4 Tax=Oryza sativa RepID=MAD18_ORYSJ 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene12953 SustainPine v3.0 940
• AutoFact: GAGA-binding transcriptional activator [Medicago truncatula] gb|ABL10372.1| GAGA-binding transcriptional activator [Medicago truncatula] 2.0e-05
• FL-Next: tr=GAGA-binding transcriptional activator; Pinus taeda (Loblolly pine). 0.0
• Sma3: GAGA-binding transcriptional activator 1.088e-16
N-terminus
sp_v3.0_unigene13003 SustainPine v3.0 580
• AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 3.409e-15
Internal
sp_v3.0_unigene13239 SustainPine v3.0 815
• AutoFact: Gag and Pol n=1 Tax=Zea mays RepID=Q8LSK0_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
N-terminus
sp_v3.0_unigene13281 SustainPine v3.0 976
• AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RBR6_RICCO 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleic acid binding protein, putative 1.209e-08
C-terminus
sp_v3.0_unigene13283 SustainPine v3.0 1512
• AutoFact: Heat stress transcription factor A-1 n=4 Tax=Oryza sativa RepID=HSFA1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock factor protein HSF8, putative 3.349e-08
C-terminus
sp_v3.0_unigene13475 SustainPine v3.0 779
• AutoFact: putative MADS-box family transcription factor [Pinus radiata] 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene13516 SustainPine v3.0 2970
• AutoFact: bZIP DNA-binding protein [Petroselinum crispum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor HBP-1a 1.03e-10
Complete
sp_v3.0_unigene13549 SustainPine v3.0 606
• AutoFact: GAGA-binding transcriptional activator BBR/BPC6-like n=1 Tax=Vitis vinifera RepID=B2Z458_VITVI 8.00001e-41
• FL-Next: tr=GAGA-binding transcriptional activator; Pinus taeda (Loblolly pine). 0.0
• Sma3: GAGA-binding transcriptional activator 4.2039e-45
C-terminus
sp_v3.0_unigene13614 SustainPine v3.0 1127
• AutoFact: Ethylene-responsive transcription factor 1A n=1 Tax=Medicago truncatula RepID=A9P6A4_MEDTR 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain