Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene8979 SustainPine v3.0 1588
• AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX11; AltName: Full=HD-ZIP protein HOX11; AltName: Full=Homeodomain transcription factor HOX11; AltName: Full=OsHox11 dbj|BAD38229.1| putative homeodomain leucine zipper protein CPHB-3 [Oryza sativa Japonica 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 2.27e-19
Complete
sp_v3.0_unigene9032 SustainPine v3.0 1097
• AutoFact: SBP-domain protein 13 [Physcomitrella patens] 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Squamosa promoter-binding protein, putative 1.819e-19
C-terminus
sp_v3.0_unigene9046 SustainPine v3.0 2799
• AutoFact: homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] sp|Q94C37.1|HDG2_ARATH RecName: Full=H 0.0
• FL-Next: sp=Homeobox-leucine zipper protein HDG2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Homeobox protein, putative 9.594e-18
Complete
sp_v3.0_unigene9085 SustainPine v3.0 825
• AutoFact: Heat shock factor protein HSF8, putative n=1 Tax=Ricinus communis RepID=B9SNT1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock factor protein, putative 2.359e-18
Putative N-terminus
sp_v3.0_unigene9089 SustainPine v3.0 2424
• AutoFact: No apical meristem-related protein n=1 Tax=Phoenix dactylifera RepID=F2WAC7_PHODC 0.0
• FL-Next: tr=NAC-domain containing protein 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene9111 SustainPine v3.0 2325
• AutoFact: pfam02701, zf-Dof, Dof domain, zinc finger 5.0e-34
• FL-Next: tr=Dof domain zinc finger DNA-binding protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: F-box family protein 1.722e-29
Complete
sp_v3.0_unigene9140 SustainPine v3.0 1548
• AutoFact: homeobox-leucine zipper protein [Pimpinella brachycarpa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 8.989e-17
Complete
sp_v3.0_unigene9175 SustainPine v3.0 2703
• AutoFact: GATA transcription factor 26 [Arabidopsis thaliana] sp|Q8W4H1.1|GAT26_ARATH RecName: Full=GATA transcription factor 26 gb|AAL32640.1| Unknown protein [Arabidopsis thaliana] gb|AAV85711.1| At4g17570 [Arabidopsis thaliana] gb|AEE83912.1| GATA transcription 0.0
• FL-Next: sp=GATA transcription factor 26; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene9219 SustainPine v3.0 1851
• AutoFact: Heat shock factor protein 7 n=1 Tax=Zea mays RepID=B6TJ68_MAIZE 0.0
• FL-Next: sp=Heat shock factor protein HSF24; Solanum peruvianum (Peruvian tomato) (Lycopersicon peruvianum). 0.0
• Sma3: Heat shock factor 1.854e-12
Complete
sp_v3.0_unigene9582 SustainPine v3.0 2223
• AutoFact: RNA polymerase sigma factor [Arabidopsis thaliana] emb|CAA77213.1| sigma-like factor [Arabidopsis thaliana] dbj|BAA78109.1| RNA polymerase sigma subunit SigE [Arabidopsis thaliana] dbj|BAB11572.1| sigma-like factor [Arabidopsis thaliana] dbj|BAH19595.1| A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9670 SustainPine v3.0 463
• AutoFact: Transcription factor HBP-1b(C1), putative n=1 Tax=Ricinus communis RepID=B9T2C4_RICCO 0.0
• FL-Next: sp=Transcription factor TGA2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: BZIP transcription factor 3.967e-22
Internal
sp_v3.0_unigene9789 SustainPine v3.0 2431
• AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 1.373e-17
Complete
sp_v3.0_unigene9805 SustainPine v3.0 1999
• AutoFact: bZIP_2 domain containing protein 5.0e-10
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v3.0_unigene9813 SustainPine v3.0 1168
• AutoFact: B3 domain-containing transcription factor FUS3 n=2 Tax=Arabidopsis RepID=FUS3_ARATH 2.0e-35
• FL-Next: tr=Transcription factor viviparous 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: VP1/ABI3-like protein 1.869e-08
Putative C-terminus
sp_v3.0_unigene9846 SustainPine v3.0 1378
• AutoFact: pfam00854, PTR2, POT family 7.00005e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 1.164e-19
C-terminus
sp_v3.0_unigene9994 SustainPine v3.0 1398
• AutoFact: F-box family protein n=2 Tax=Populus trichocarpa RepID=B9IES2_POPTR 2.0e-31
• FL-Next: tr=Dof transcription factor; Pinus pinaster (Maritime pine). 0.0
• Sma3: F-box family protein 2.011e-39
N-terminus
sp_v3.0_unigene10143 SustainPine v3.0 1922
• AutoFact: transcription factor TCP9 [Arabidopsis thaliana] sp|O64647.1|TCP9_ARATH RecName: Full=Transcription factor TCP9 gb|AAK43925.1|AF370606_1 putative PCF2-like DNA binding protein [Arabidopsis thaliana] gb|AAC06168.1| putative PCF2-like DNA binding protein [A 1.0e-27
• FL-Next: tr=Transcription factor TCP15; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Transcription factor, putative 3.041e-15
Complete
sp_v3.0_unigene10188 SustainPine v3.0 2096
• AutoFact: Type I MADS-box transcription factor n=1 Tax=Cryptomeria japonica RepID=B2ZX88_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type I MADS-box transcription factor 4.873e-06
Putative Complete
sp_v3.0_unigene10189 SustainPine v3.0 542
• AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 4.312e-21
N-terminus
sp_v3.0_unigene10196 SustainPine v3.0 1950
• AutoFact: Heat stress transcription factor B-2b n=3 Tax=Oryza sativa RepID=HFB2B_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock factor protein, putative 4.734e-19
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain