Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RmlC-like jelly roll fold

Term: IPR014710  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene59270 SustainPine v3.0 431
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.4013e-45
Internal
sp_v3.0_unigene59304 SustainPine v3.0 184
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 3.0e-12
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Gag-Pol polyprotein 8.992e-07
Internal
sp_v3.0_unigene59349 SustainPine v3.0 422
• AutoFact: Embryo globulin n=2 Tax=Triticeae RepID=Q03678_HORVU 2.0e-36
• FL-Next: tr=Vicilin-like storage protein; Picea glauca (White spruce) (Pinus glauca). 0.0
C-terminus
sp_v3.0_unigene59373 SustainPine v3.0 395
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.757e-17
Internal
sp_v3.0_unigene59455 SustainPine v3.0 488
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.676e-13
Internal
sp_v3.0_unigene59779 SustainPine v3.0 366
• AutoFact: Potassium channel KAT1 n=3 Tax=Arabidopsis RepID=KAT1_ARATH 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Inward rectifying potassium channel 1.249e-12
Internal
sp_v3.0_unigene59918 SustainPine v3.0 442
• AutoFact: cyclic nucleotide-gated ion channel 2 [Hordeum vulgare subsp. vulgare] 4.0e-06
• FL-Next: sp=Cyclic nucleotide-gated ion channel 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene60275 SustainPine v3.0 374
• AutoFact: Unassigned protein 2.0e-29
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative N-terminus
sp_v3.0_unigene60279 SustainPine v3.0 201
• AutoFact: RVT_2 domain containing protein 5.0e-17
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene60352 SustainPine v3.0 216
• AutoFact: cyclic nucleotide-gated channel 15 [Arabidopsis thaliana] sp|Q9SL29.1|CNG15_ARATH RecName: Full=Putative cyclic nucleotide-gated ion channel 15; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 15 gb|AAD29827.1| putative cyclic nucleo 1.0e-11
• FL-Next: sp=Putative cyclic nucleotide-gated ion channel 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene60892 SustainPine v3.0 245
• AutoFact: Potassium channel SKOR n=2 Tax=Arabidopsis thaliana RepID=SKOR_ARATH 2.0e-18
• FL-Next: sp=Potassium channel SKOR; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene61434 SustainPine v3.0 326
• AutoFact: Mannose-6-phosphate isomerase n=1 Tax=Picea sitchensis RepID=B8LLA2_PICSI 2.0e-16
• FL-Next: sp=Mannose-6-phosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mannose-6-phosphate isomerase 9.123e-12
Putative N-terminus
sp_v3.0_unigene61901 SustainPine v3.0 133
• AutoFact: Mannose-6-phosphate isomerase n=1 Tax=Picea sitchensis RepID=B8LLA2_PICSI 1.0e-08
• FL-Next: sp=Mannose-6-phosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mannose-6-phosphate isomerase 5.146e-15
Internal
sp_v3.0_unigene62201 SustainPine v3.0 238
• AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9RKK9_RICCO 9.0e-19
• FL-Next: sp=Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene62225 SustainPine v3.0 217
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62492 SustainPine v3.0 230
• AutoFact: cyclic nucleotide and calmodulin-regulated ion channel-like protein [Arabidopsis thaliana] 6.0e-23
• FL-Next: sp=Putative cyclic nucleotide-gated ion channel 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cyclic nucleotide-gated ion channel, putative 5.841e-23
Internal
sp_v3.0_unigene63377 SustainPine v3.0 217
• AutoFact: AKT1-like K+ channel LilKT1 n=1 Tax=Lilium longiflorum RepID=A3RG92_LILLO 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potassium channel 6.912e-25
Internal
sp_v3.0_unigene64069 SustainPine v3.0 205
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
Internal
sp_v3.0_unigene66263 SustainPine v3.0 413
• AutoFact: Legumin-like storage protein n=1 Tax=Picea glauca RepID=Q40870_PICGL 2.0e-35
• FL-Next: tr=Legumin-like storage protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Legumin 8.957e-25
C-terminus
sp_v3.0_unigene66419 SustainPine v3.0 358
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 1.0e-24
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.608e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain