Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RmlC-like jelly roll fold

Term: IPR014710  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene13396 SustainPine v3.0 3562
• AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|O82226.2|CNGC6_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 6; Short=AtCNGC6; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 6 emb|CAB40131.1| cyclic nucl 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cyclic nucleotide-gated ion channel, putative 5.935e-36
Putative Complete
sp_v3.0_unigene14525 SustainPine v3.0 486
• AutoFact: Shaker-like potassium channel 1 n=1 Tax=Populus euphratica RepID=D2KPG5_POPEU 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene14769 SustainPine v3.0 1333
• AutoFact: cupin 2 domain-containing protein [Nostoc punctiforme PCC 73102] gb|ACC80140.1| Cupin 2, conserved barrel domain protein [Nostoc punctiforme PCC 73102] 8.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene15827 SustainPine v3.0 544
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.354e-14
Internal
sp_v3.0_unigene16701 SustainPine v3.0 305
• AutoFact: Potassium channel KAT2, putative n=1 Tax=Ricinus communis RepID=B9S124_RICCO 9.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potassium channel 1.648e-15
Internal
sp_v3.0_unigene16836 SustainPine v3.0 1060
• AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB 0.0
• FL-Next: sp=Putative germin-like protein 3-2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Germin-like protein 3.803e-40
Complete
sp_v3.0_unigene17602 SustainPine v3.0 1471
• AutoFact: 5-formyltetrahydrofolate cyclo-ligase-like protein n=4 Tax=Arabidopsis RepID=Q8L539_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene18903 SustainPine v3.0 955
• AutoFact: Potassium channel AKT1, putative n=1 Tax=Ricinus communis RepID=B9STQ4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potassium channel 9.916e-34
Internal
sp_v3.0_unigene19081 SustainPine v3.0 366
• AutoFact: Potassium channel n=3 Tax=Andropogoneae RepID=O04242_MAIZE 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potassium channel 1.244e-13
Internal
sp_v3.0_unigene19390 SustainPine v3.0 695
• AutoFact: Vicilin-like storage protein n=2 Tax=Picea glauca RepID=Q40844_PICGL 0.0
• FL-Next: tr=Vicilin-like storage protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Vicilin-like storage protein 7.31e-06
C-terminus
sp_v3.0_unigene20530 SustainPine v3.0 560
• AutoFact: Cupin_5 domain containing protein 5.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene20698 SustainPine v3.0 1375
• AutoFact: Nutrient reservoir, putative n=1 Tax=Ricinus communis RepID=B9SYN6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Legumin-like protein 5.227e-14
C-terminus
sp_v3.0_unigene20850 SustainPine v3.0 531
• AutoFact: Legumin-like storage protein n=1 Tax=Pseudotsuga menziesii RepID=Q40933_PSEMZ 7.0e-31
• FL-Next: tr=Legumin-like storage protein; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Legumin 8.957e-25
C-terminus
sp_v3.0_unigene21007 SustainPine v3.0 1288
• AutoFact: Nutrient reservoir, putative n=1 Tax=Ricinus communis RepID=B9T4A4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Legumin-like protein 4.936e-14
C-terminus
sp_v3.0_unigene21069 SustainPine v3.0 959
• AutoFact: Germin-like protein n=5 Tax=Pinaceae RepID=O65010_PINRA 0.0
• FL-Next: tr=Germin-like protein; Pinus caribaea. 0.0
• Sma3: Germin-like protein 4.132e-37
Complete
sp_v3.0_unigene21169 SustainPine v3.0 1397
• AutoFact: Nutrient reservoir, putative n=1 Tax=Ricinus communis RepID=B9T4A4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Legumin-like protein 5.531e-14
Complete
sp_v3.0_unigene21911 SustainPine v3.0 814
• AutoFact: Germin-like protein n=5 Tax=Pinaceae RepID=O65010_PINRA 0.0
• FL-Next: tr=Germin-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Germin-like protein 5.136e-29
Complete
sp_v3.0_unigene21947 SustainPine v3.0 479
• AutoFact: putative protein phosphatase 2C [Arabidopsis thaliana] 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene22026 SustainPine v3.0 870
• AutoFact: Germin-like protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RQ32_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Germin-like protein 6.51604e-43
Complete
sp_v3.0_unigene22062 SustainPine v3.0 560
• AutoFact: putative cyclic nucleotide and calmodulin-regulated ion channel protein [Hordeum vulgare subsp. vulgare] 8.0e-21
• FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromosome undetermined scaffold_109, whole genome shotgun sequence 4.62e-06
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain