Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, CCHC-type

Term: IPR001878  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene10203 SustainPine v3.0 817
• AutoFact: Histone H4 n=1 Tax=Camellia sinensis RepID=F4YF87_CAMSI 7.0e-38
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H4 1.194e-11
Complete
sp_v3.0_unigene10334 SustainPine v3.0 3686
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 5.759e-13
Complete
sp_v3.0_unigene10384 SustainPine v3.0 1728
• AutoFact: RecName: Full=Cysteine-rich receptor-like protein kinase 17; Short=Cysteine-rich RLK17; AltName: Full=Protein EMBRYO DEFECTIVE 1290; Flags: Precursor 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative serine/threonine kinase protein 1.046e-17
Putative C-terminus
sp_v3.0_unigene10387 SustainPine v3.0 785
• AutoFact: FK506-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R9N7_RICCO 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase, FKBP-type 5.796e-21
C-terminus
sp_v3.0_unigene10456 SustainPine v3.0 2937
• AutoFact: RecName: Full=Pleiotropic drug resistance protein 2; AltName: Full=NpPDR2 emb|CAH40786.1| PDR-like ABC transporter [Nicotiana plumbaginifolia] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Complete
sp_v3.0_unigene10469 SustainPine v3.0 1637
• AutoFact: PREDICTED: similar to zinc finger (C3HC4-type RING finger) family protein n=1 Tax=Vitis vinifera RepID=UPI000198426A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger (C3HC4-type RING finger) protein-like 2.667e-11
Complete
sp_v3.0_unigene10494 SustainPine v3.0 1323
• AutoFact: cysteine-rich receptor-like protein kinase 42 [Arabidopsis thaliana] sp|Q9FNE1.1|CRK42_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 42; Short=Cysteine-rich RLK42; Flags: Precursor dbj|BAB11593.1| receptor-like serine/threonine kinase [Ar 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 7.259e-18
C-terminus
sp_v3.0_unigene10648 SustainPine v3.0 1282
• AutoFact: Cinnamoyl-CoA reductase n=2 Tax=Malvoideae RepID=D9ZKR8_9ROSI 0.0
• FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cinnamoyl-CoA reductase 0.0
Putative Complete
sp_v3.0_unigene10728 SustainPine v3.0 1045
• AutoFact: rve domain containing protein 5.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene10846 SustainPine v3.0 1398
• AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9S058_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cinnamoyl-CoA reductase 7.35682e-43
Complete
sp_v3.0_unigene11140 SustainPine v3.0 797
• AutoFact: [GC] COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: UDP-glucosyltransferase, putative 4.942e-32
C-terminus
sp_v3.0_unigene11145 SustainPine v3.0 1798
• AutoFact: Contains similarity to gb|Y13720 Hap2a transcription factor from Arabidopsis thaliana 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nuclear transcription factor Y subunit A-3 3.757e-13
Putative Complete
sp_v3.0_unigene11164 SustainPine v3.0 1495
• AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Structural maintenance of chromosomes protein 4 1.736e-09
Internal
sp_v3.0_unigene11203 SustainPine v3.0 346
• AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AED97925.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Growth regulator like protein 4.611e-18
Internal
sp_v3.0_unigene11240 SustainPine v3.0 3090
• AutoFact: putative PDR-like ABC transporter [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Putative Complete
sp_v3.0_unigene11255 SustainPine v3.0 1837
• AutoFact: RecName: Full=Cytochrome P450 750A1; AltName: Full=Cytochrome P450 CYPC gb|AAX07433.1| cytochrome P450 CYPC [Pinus taeda] 0.0
• FL-Next: sp=Cytochrome P450 750A1; Pinus taeda (Loblolly pine). 0.0
• Sma3: Flavonoid 3'-hydroxylase 0.0
Complete
sp_v3.0_unigene11316 SustainPine v3.0 2168
• AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nuclear transcription factor Y subunit A-3 6.06e-10
Complete
sp_v3.0_unigene11330 SustainPine v3.0 2702
• AutoFact: BY-2 kinesin-like protein 5 n=1 Tax=Nicotiana tabacum RepID=Q9AVP5_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinesin motor protein, putative, expressed 2.801e-07
Putative Complete
sp_v3.0_unigene11342 SustainPine v3.0 1272
• AutoFact: putative actin depolymerizing factor [Sorghum bicolor] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene11390 SustainPine v3.0 1030
• AutoFact: Unassigned protein
• FL-Next: sp=UNC93-like protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain