Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, CCHC-type

Term: IPR001878  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene18784 SustainPine v3.0 349
AutoFact: histone H4 [Hyacinthus orientalis] 2.0e-30
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H4 1.194e-11
Putative Complete
sp_v3.0_unigene18910 SustainPine v3.0 1962
AutoFact: serine/threonine kinase-like protein [Arabidopsis thaliana] emb|CAB79273.1| serine/threonine kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 6.372e-15
Putative Complete
sp_v3.0_unigene18983 SustainPine v3.0 521
AutoFact: Unassigned protein 6.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene19013 SustainPine v3.0 555
AutoFact: cytochrome p450-dependent monooxygenase [Brassica napus] 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome P450 4.491e-16
C-terminus
sp_v3.0_unigene19117 SustainPine v3.0 446
AutoFact: S-locus lectin protein kinase family protein n=1 Tax=Glycine max RepID=C6ZRU8_SOYBN 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-receptor kinase, putative 2.001e-16
Internal
sp_v3.0_unigene19260 SustainPine v3.0 368
AutoFact: cysteine-rich receptor-like protein kinase 13 [Arabidopsis thaliana] sp|Q0PW40.1|CRK13_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 13; Short=Cysteine-rich RLK13; Flags: Precursor gb|ABG74916.1| cysteine-rich receptor-like kinase 13 [Ara 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr19 scaffold_4, whole genome shotgun sequence 1.105e-13
Internal
sp_v3.0_unigene19296 SustainPine v3.0 247
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein n=1 Tax=Medicago truncatula RepID=Q2HW87_MEDTR 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene19339 SustainPine v3.0 1904
AutoFact: protein serine/arginine-rich 22 [Arabidopsis thaliana] ref|NP_001078474.1| protein serine/arginine-rich 22 [Arabidopsis thaliana] emb|CAA19765.1| RSZp22 splicing factor [Arabidopsis thaliana] gb|AAD12769.1| 9G8-like SR protein [Arabidopsis thaliana] emb|C 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Splicing factor, arginine/serine-rich 7 8.677e-15
Complete
sp_v3.0_unigene19341 SustainPine v3.0 402
AutoFact: Unassigned protein 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene19342 SustainPine v3.0 3014
AutoFact: Replication factor A 1, rfa1, putative n=1 Tax=Ricinus communis RepID=B9S1L9_RICCO 0.0
FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Replication protein A1-like protein 4.155e-08
Complete
sp_v3.0_unigene19473 SustainPine v3.0 279
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 4.158e-10
Internal
sp_v3.0_unigene19540 SustainPine v3.0 585
AutoFact: Gland-specific fatty acyl-CoA reductase 1 n=1 Tax=Artemisia annua RepID=E9KL86_ARTAN 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Male sterility protein, putative 2.067e-15
Internal
sp_v3.0_unigene19560 SustainPine v3.0 442
AutoFact: cysteine-rich receptor-like protein kinase 7 [Arabidopsis thaliana] sp|Q8L7G3.1|CRK7_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 7; Short=Cysteine-rich RLK7; Flags: Precursor gb|AAM91654.1| putative serine/threonine kinase [Arabidopsis 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr10 scaffold_76, whole genome shotgun sequence 1.174e-06
Internal
sp_v3.0_unigene19595 SustainPine v3.0 1459
AutoFact: Xyloglucan endotransglucosylase/hydrolase n=3 Tax=Gossypium hirsutum RepID=E3UZI7_GOSHI 0.0
FL-Next: tr=Pollen major allergen No.121 isoform 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Xyloglucan endotransglycosylase 9.65495e-42
Putative Complete
sp_v3.0_unigene19666 SustainPine v3.0 435
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.651e-16
Internal
sp_v3.0_unigene19687 SustainPine v3.0 337
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.37e-06
Internal
sp_v3.0_unigene19799 SustainPine v3.0 308
AutoFact: Unassigned protein 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene19967 SustainPine v3.0 394
AutoFact: Putative copia protein n=1 Tax=Oryza sativa Japonica Group RepID=Q84T44_ORYSJ 9.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.794e-18
C-terminus
sp_v3.0_unigene20302 SustainPine v3.0 219
AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene20553 SustainPine v3.0 436
AutoFact: FAP multi-domain protein 1.0e-15
Sma3: Glycine-rich protein 7.373e-14
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain