Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, CCHC-type

Term: IPR001878  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene14896 SustainPine v3.0 293
• AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Peperomia caperata RepID=Q56GE9_PEPCA 3.0e-32
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
Putative N-terminus
sp_v3.0_unigene15050 SustainPine v3.0 1401
• AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] gb|ABF96565.1| CCAAT-box transcription factor complex WHAP3, putative, expressed [Oryza sativa Japonica Group] 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nuclear transcription factor Y subunit A-7 2.159e-08
N-terminus
sp_v3.0_unigene15148 SustainPine v3.0 1886
• AutoFact: Amino acid/polyamine transporter II [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Amino acid transporter 3.818e-21
Complete
sp_v3.0_unigene15477 SustainPine v3.0 618
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 3.0e-30
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.637e-14
Putative Complete
sp_v3.0_unigene15707 SustainPine v3.0 1580
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 9.80909e-45
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Copia-type polyprotein 1.613e-10
C-terminus
sp_v3.0_unigene15771 SustainPine v3.0 1013
• AutoFact: [Q] COG2124 Cytochrome P450 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Flavonoid 3',5'-hydroxylase 5.415e-38
C-terminus
sp_v3.0_unigene15793 SustainPine v3.0 2010
• AutoFact: alternative splicing regulator [Triticum aestivum] 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene15827 SustainPine v3.0 544
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.354e-14
Internal
sp_v3.0_unigene15931 SustainPine v3.0 2562
• AutoFact: DNA damage-binding protein 2 [Arabidopsis thaliana] sp|Q6NQ88.1|DDB2_ARATH RecName: Full=Protein DAMAGED DNA-BINDING 2; AltName: Full=UV-damaged DNA-binding protein 2 gb|AAQ65193.1| At5g58760 [Arabidopsis thaliana] dbj|BAD42887.1| putative protein [Arabid 0.0
• FL-Next: sp=Protein DAMAGED DNA-BINDING 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene15965 SustainPine v3.0 1028
• AutoFact: Dimer_Tnp_hAT domain containing protein 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene16034 SustainPine v3.0 643
• AutoFact: Drf_FH1 multi-domain protein 9.0e-18
• Sma3: Glycine-rich protein 9.923e-13
coding
sp_v3.0_unigene16129 SustainPine v3.0 1180
• AutoFact: Phi class glutathione transferase n=1 Tax=Cathaya argyrophylla RepID=B8YDC4_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 0.0
Complete
sp_v3.0_unigene16212 SustainPine v3.0 2300
• AutoFact: putative glycerophosphoryl diester phosphodiesterase 1 [Arabidopsis thaliana] sp|Q9FJ62.1|GLPQ1_ARATH RecName: Full=Probable glycerophosphoryl diester phosphodiesterase 1; Flags: Precursor dbj|BAB08565.1| unnamed protein product [Arabidopsis thaliana] gb| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycerophosphoryl diester phosphodiesterase, putative 1.908e-07
C-terminus
sp_v3.0_unigene16253 SustainPine v3.0 1485
• AutoFact: Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9R835_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene16343 SustainPine v3.0 889
• AutoFact: Putative DEAD-box protein abstrakt n=1 Tax=Trifolium pratense RepID=Q2PEY4_TRIPR 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene16363 SustainPine v3.0 552
• AutoFact: RecName: Full=Cytochrome P450 71A1; AltName: Full=ARP-2; AltName: Full=CYPLXXIA1 gb|AAA32913.1| cytochrome P-450LXXIA1 (cyp71A1) [Persea americana] 9.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 1.163e-18
Internal
sp_v3.0_unigene16392 SustainPine v3.0 553
• AutoFact: cytochrome p450-dependent monooxygenase [Brassica napus] 9.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 1.035e-20
C-terminus
sp_v3.0_unigene16559 SustainPine v3.0 1011
• AutoFact: Cytochrome P450 monooxygenase CYP736B n=3 Tax=Vitis RepID=C0KLZ0_9ROSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 3.821e-27
Putative C-terminus
sp_v3.0_unigene16765 SustainPine v3.0 893
• AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-38
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H4 1.194e-11
Complete
sp_v3.0_unigene16836 SustainPine v3.0 1060
• AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB 0.0
• FL-Next: sp=Putative germin-like protein 3-2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Germin-like protein 3.803e-40
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain