Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S5 domain 2-type fold, subgroup

Term: IPR014721  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene121800 SustainPine v3.0 238
• AutoFact: Bifunctional fucokinase/fucose pyrophosphorylase n=7 Tax=Camelineae RepID=FKGP_ARATH 3.0e-12
• FL-Next: sp=Bifunctional fucokinase/fucose pyrophosphorylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: F6F3.3 protein 9.26e-06
N-terminus
sp_v3.0_unigene125116 SustainPine v3.0 437
• AutoFact: Polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q8W153_ORYSJ 9.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.351e-18
Putative N-terminus
sp_v3.0_unigene126019 SustainPine v3.0 326
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2RBA0_ORYSJ 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.413e-17
N-terminus
sp_v3.0_unigene126441 SustainPine v3.0 557
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 7.311e-11
Internal
sp_v3.0_unigene126677 SustainPine v3.0 2734
• AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation elongation factor, putative 0.0
Misassembled
sp_v3.0_unigene126829 SustainPine v3.0 1438
• AutoFact: elongation factor EF-2 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 0.0
Complete
sp_v3.0_unigene126898 SustainPine v3.0 915
• AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
N-terminus
sp_v3.0_unigene128485 SustainPine v3.0 419
• AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
• FL-Next: sp=Elongation factor 2; Beta vulgaris (Sugar beet). 0.0
• Sma3: Elongation factor 2 0.0
Internal
sp_v3.0_unigene130212 SustainPine v3.0 488
• AutoFact: OSIGBa0134J07.9 protein n=1 Tax=Oryza sativa RepID=Q01LI0_ORYSA 6.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.5861e-44
Internal
sp_v3.0_unigene130465 SustainPine v3.0 307
• AutoFact: galactokinase like protein [Arabidopsis thaliana] 8.0e-06
• FL-Next: sp=L-arabinokinase; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene130523 SustainPine v3.0 291
• AutoFact: RecName: Full=Elongation factor 2; Short=EF-2 emb|CAB09900.1| elongation factor 2 [Beta vulgaris subsp. vulgaris] 4.0e-22
• FL-Next: sp=Elongation factor 2; Beta vulgaris (Sugar beet). 0.0
• Sma3: Elongation factor 2 0.0
Internal
sp_v3.0_unigene130564 SustainPine v3.0 464
• AutoFact: Elongation factor EF-G n=4 Tax=Arabidopsis RepID=Q9SI75_ARATH 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene131179 SustainPine v3.0 440
• AutoFact: L-arabinokinase n=2 Tax=Arabidopsis RepID=ARAK_ARATH 7.0e-35
• FL-Next: sp=L-arabinokinase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene131224 SustainPine v3.0 296
• AutoFact: Obtusifoliol-14-demethylase n=5 Tax=Solanaceae RepID=A0PFU3_PETHY 4.0e-19
• FL-Next: sp=Sterol 14-demethylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative obtusifoliol 14-alpha demethylase 3.493e-08
Internal
sp_v3.0_unigene131351 SustainPine v3.0 316
• AutoFact: Mevalonate disphosphate decarboxylase n=1 Tax=Ginkgo biloba RepID=Q5UCT8_GINBI 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mevalonate disphosphate decarboxylase 4.879e-17
Internal
sp_v3.0_unigene131547 SustainPine v3.0 493
• AutoFact: L-fucokinase/GDP-L-fucose pyrophosphorylase [Arabidopsis thaliana] sp|Q9LNJ9.2|FKGP_ARATH RecName: Full=Bifunctional fucokinase/fucose pyrophosphorylase; Short=AtFKGP; Includes: RecName: Full=L-fucokinase; Includes: RecName: Full=Fucose-1-phosphate guanyl 5.0e-33
• FL-Next: sp=Bifunctional fucokinase/fucose pyrophosphorylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene131641 SustainPine v3.0 484
• AutoFact: 40S ribosomal protein S2 n=11 Tax=Endopterygota RepID=E2ACC9_9HYME 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 3.936e-11
N-terminus
sp_v3.0_unigene131823 SustainPine v3.0 351
• AutoFact: putative partner of Nob1 [Oryza sativa Japonica Group] dbj|BAB90119.1| putative partner of Nob1 [Oryza sativa Japonica Group] gb|EEE55513.1| hypothetical protein OsJ_03725 [Oryza sativa Japonica Group] 7.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Partner of Nob1 1.355e-08
C-terminus
sp_v3.0_unigene131851 SustainPine v3.0 376
• AutoFact: ATP binding protein, putative (EC:2.7.1.52) 7.0e-22
• FL-Next: sp=Bifunctional fucokinase/fucose pyrophosphorylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene132017 SustainPine v3.0 484
• AutoFact: galactokinase [Arabidopsis thaliana] sp|Q8VYG2.1|GALAK_ARATH RecName: Full=Galacturonokinase; AltName: Full=D-galacturonic acid-1-P kinase gb|AAL59925.1| putative galactokinase [Arabidopsis thaliana] gb|AAM20366.1| putative galactokinase [Arabidopsis thal 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain