Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S5 domain 2-type fold, subgroup

Term: IPR014721  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene73973 SustainPine v3.0 421
• AutoFact: Ribosomal protein rps16 n=1 Tax=Arenicola marina RepID=A8UEM4_AREMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S9, putative 0.0
N-terminus
sp_v3.0_unigene74513 SustainPine v3.0 401
• AutoFact: 40S ribosomal protein S16-3 n=2 Tax=Arabidopsis thaliana RepID=A8MRX2_ARATH 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S16 1.467e-36
N-terminus
sp_v3.0_unigene74565 SustainPine v3.0 283
• AutoFact: 116 kda u5 small nuclear ribonucleoprotein component [Cryptococcus neoformans var. neoformans JEC21] ref|XP_775690.1| hypothetical protein CNBD4190 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL21043.1| hypothetical protein CNBD4190 [Cryptococcu 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor tu gtp-binding domain protein 2 1.197e-08
Internal
sp_v3.0_unigene74937 SustainPine v3.0 321
• AutoFact: 40S ribosomal protein S2 n=1 Tax=Picea abies RepID=Q9AVU0_PICAB 0.0
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 2.544e-19
Internal
sp_v3.0_unigene76320 SustainPine v3.0 205
• AutoFact: elongation factor 2 [Sclerotinia sclerotiorum 1980] gb|EDN96415.1| elongation factor 2 [Sclerotinia sclerotiorum 1980 UF-70] 2.0e-19
• FL-Next: sp=Elongation factor 2; Beta vulgaris (Sugar beet). 0.0
• Sma3: Elongation factor 2 0.0
Internal
sp_v3.0_unigene76805 SustainPine v3.0 102
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 2.0e-09
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA topoisomerase 2 1.565e-22
Internal
sp_v3.0_unigene77258 SustainPine v3.0 164
• AutoFact: elongation factor 2 [Meyerozyma guilliermondii ATCC 6260] sp|A5DI11.1|EF2_PICGU RecName: Full=Elongation factor 2; Short=EF-2 gb|EDK38814.1| elongation factor 2 [Meyerozyma guilliermondii ATCC 6260] 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 5.46506e-43
Internal
sp_v3.0_unigene77439 SustainPine v3.0 522
• AutoFact: RecName: Full=Elongation factor 2; Short=EF-2 gb|AAO32562.1| EFT2 [Lachancea kluyveri] 0.0
• FL-Next: sp=Elongation factor 2; Beta vulgaris (Sugar beet). 0.0
• Sma3: Elongation factor 2 0.0
Internal
sp_v3.0_unigene77531 SustainPine v3.0 309
• AutoFact: ribosomal protein S2 [Coprinopsis cinerea okayama7#130] gb|EAU91621.1| ribosomal protein S2 [Coprinopsis cinerea okayama7#130] 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 3.365e-15
N-terminus
sp_v3.0_unigene77584 SustainPine v3.0 384
• AutoFact: 40S ribosomal protein S5 n=2 Tax=Pucciniales RepID=E3KJL1_PUCGT 6.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 2.129e-11
N-terminus
sp_v3.0_unigene77691 SustainPine v3.0 278
• AutoFact: PREDICTED: similar to LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Gallus gallus] 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Probable U6 snRNA-associated Sm-like protein LSm4 4.31e-13
N-terminus
sp_v3.0_unigene77703 SustainPine v3.0 333
• AutoFact: Ribosomal protein S2, putative n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6R7P8_CRYGW 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 1.639e-19
Putative N-terminus
sp_v3.0_unigene77951 SustainPine v3.0 289
• AutoFact: Related to U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Sporisorium reilianum RepID=E6ZPV4_9BASI 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Probable U6 snRNA-associated Sm-like protein LSm4 2.848e-13
N-terminus
sp_v3.0_unigene78303 SustainPine v3.0 374
• AutoFact: 40S ribosomal protein S2 n=1 Tax=Picea abies RepID=Q9AVU0_PICAB 5.0e-35
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 1.855e-19
C-terminus
sp_v3.0_unigene78348 SustainPine v3.0 228
• AutoFact: Mitochondrial translation elongation factor G n=1 Tax=Polysphondylium pallidum RepID=D3BMN4_POLPA 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene78597 SustainPine v3.0 282
• AutoFact: ATPase [Cryptococcus neoformans var. neoformans JEC21] ref|XP_775817.1| hypothetical protein CNBD2270 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL21170.1| hypothetical protein CNBD2270 [Cryptococcus neoformans var. neoformans B-3501A] gb|AAW43 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AAA-type ATPase family protein, putative, expressed 9.203e-08
Internal
sp_v3.0_unigene79385 SustainPine v3.0 443
• AutoFact: Translation elongation factor EF-2 subunit, putative n=2 Tax=Aspergillus RepID=B8NGN7_ASPFN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 2.24208e-44
Putative N-terminus
sp_v3.0_unigene80103 SustainPine v3.0 244
• AutoFact: Elongation factor G, chloroplastic n=1 Tax=Glycine max RepID=EFGC_SOYBN 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80781 SustainPine v3.0 405
• AutoFact: DNA topoisomerase 2 n=1 Tax=Naegleria gruberi RepID=D2UZM0_NAEGR 3.0e-12
• FL-Next: sp=DNA topoisomerase 2; Pisum sativum (Garden pea). 0.0
Internal
sp_v3.0_unigene81231 SustainPine v3.0 273
• AutoFact: 40S ribosomal protein S2 n=1 Tax=Picea abies RepID=Q9AVU0_PICAB 9.0e-05
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain