Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S5 domain 2-type fold, subgroup

Term: IPR014721  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene63625 SustainPine v3.0 233
AutoFact: Chloroplast elongation factor G n=2 Tax=Chlamydomonadales RepID=D8UC44_VOLCA 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene64651 SustainPine v3.0 116
AutoFact: DNA mismatch repair protein n=3 Tax=Arabidopsis RepID=Q941I6_ARATH 2.0e-08
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene65149 SustainPine v3.0 190
AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q851Y3_ORYSJ 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.825e-11
Putative N-terminus
sp_v3.0_unigene65181 SustainPine v3.0 174
AutoFact: Elongation factor 2 n=2 Tax=Chlorellales RepID=EF2_PARKE 4.0e-16
FL-Next: sp=Elongation factor 2; Parachlorella kessleri (Green alga) (Chlorella kessleri). 0.0
Sma3: Elongation factor 2 8.16e-16
Internal
sp_v3.0_unigene65323 SustainPine v3.0 103
AutoFact: Translational elongation factor-2 (Fragment) n=1 Tax=Plathemis lydia RepID=D0UNI0_9ODON 7.0e-12
FL-Next: sp=Elongation factor 2; Beta vulgaris (Sugar beet). 0.0
Sma3: Elongation factor 2 1.427e-12
Internal
sp_v3.0_unigene65424 SustainPine v3.0 120
AutoFact: elongation factor [Triticum aestivum] 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65790 SustainPine v3.0 212
AutoFact: elongation factor [Triticum aestivum] 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 2 1.824e-19
Internal
sp_v3.0_unigene65993 SustainPine v3.0 319
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene66478 SustainPine v3.0 387
AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.105e-11
N-terminus
sp_v3.0_unigene67235 SustainPine v3.0 247
AutoFact: Elongation factor 2 (Fragment) n=1 Tax=Nicotiana tabacum RepID=Q9FEL2_TOBAC 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 2 1.219e-40
Internal
sp_v3.0_unigene67807 SustainPine v3.0 160
AutoFact: homoserine kinase [Arabidopsis thaliana] 9.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene68375 SustainPine v3.0 200
AutoFact: homoserine kinase [Arabidopsis thaliana] 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homoserine kinase 1.411e-12
Internal
sp_v3.0_unigene68647 SustainPine v3.0 315
AutoFact: homoserine kinase [Arabidopsis thaliana] 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homoserine kinase 1.411e-12
C-terminus
sp_v3.0_unigene69414 SustainPine v3.0 196
AutoFact: homoserine kinase [Arabidopsis thaliana] 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homoserine kinase 1.411e-12
Internal
sp_v3.0_unigene69460 SustainPine v3.0 233
AutoFact: Thiamin pyrophosphokinase, putative n=1 Tax=Ricinus communis RepID=B9SAN6_RICCO 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thiamin pyrophosphokinase, putative 7.149e-09
Internal
sp_v3.0_unigene70067 SustainPine v3.0 329
AutoFact: putative 40S ribosomal protein S2 [Oryza sativa Japonica Group] 2.0e-29
FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 40S ribosomal protein S2 3.791e-15
C-terminus
sp_v3.0_unigene70783 SustainPine v3.0 358
AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S2 3.244e-15
N-terminus
sp_v3.0_unigene72204 SustainPine v3.0 249
AutoFact: Unassigned protein 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene73469 SustainPine v3.0 379
AutoFact: [J] COG0103 Ribosomal protein S9 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S16 6.53e-32
N-terminus
sp_v3.0_unigene73729 SustainPine v3.0 471
AutoFact: RecName: Full=Elongation factor 2; Short=EF-2 gb|AAO32487.1| EFT [Naumovia castellii] 0.0
FL-Next: sp=Elongation factor 2; Parachlorella kessleri (Green alga) (Chlorella kessleri). 0.0
Sma3: Elongation factor 2 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain