Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S5 domain 2-type fold, subgroup

Term: IPR014721  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene52792 SustainPine v3.0 181
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 3.0e-14
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA topoisomerase 2 5.206e-20
Internal
sp_v3.0_unigene53403 SustainPine v3.0 240
• AutoFact: putative thiamin pyrophosphokinase [Oryza sativa Japonica Group] dbj|BAD53067.1| putative thiamin pyrophosphokinase [Oryza sativa Japonica Group] 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thiamin pyrophosphokinase, putative 8.35e-09
Internal
sp_v3.0_unigene53828 SustainPine v3.0 471
• AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AAA-type ATPase family protein, putative, expressed 1.451e-07
Internal
sp_v3.0_unigene54137 SustainPine v3.0 223
• AutoFact: putative galactokinase protein [Olimarabidopsis pumila] 6.0e-18
• FL-Next: sp=L-arabinokinase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene54446 SustainPine v3.0 502
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Trichinella spiralis RepID=E5SB91_TRISP 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.06377e-44
Internal
sp_v3.0_unigene54827 SustainPine v3.0 402
• AutoFact: putative galactose kinase [Trifolium pratense] 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Galactokinase 1.394e-11
C-terminus
sp_v3.0_unigene56338 SustainPine v3.0 157
• AutoFact: PREDICTED: U5 snRNP-specific protein, 116 kD n=1 Tax=Taeniopygia guttata RepID=UPI000194DBA9 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Aureococcus anophagefferens (Harmful bloom alga). 0.0
• Sma3: Elongation factor tu gtp-binding domain protein 2 6.505e-09
Internal
sp_v3.0_unigene56342 SustainPine v3.0 274
• AutoFact: homoserine kinase [Arabidopsis thaliana] 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homoserine kinase 1.471e-12
Internal
sp_v3.0_unigene56621 SustainPine v3.0 176
• AutoFact: DNA topoisomerase 2 n=1 Tax=Nicotiana tabacum RepID=Q8GSC4_TOBAC 1.0e-18
• FL-Next: sp=DNA topoisomerase 2; Pisum sativum (Garden pea). 0.0
• Sma3: DNA topoisomerase 2 3.095e-35
Internal
sp_v3.0_unigene58160 SustainPine v3.0 319
• AutoFact: 40S ribosomal protein S2 n=1 Tax=Picea abies RepID=Q9AVU0_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 2.61e-19
Internal
sp_v3.0_unigene58359 SustainPine v3.0 232
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 4.0e-12
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA topoisomerase 2 1.459e-38
Internal
sp_v3.0_unigene58528 SustainPine v3.0 221
• AutoFact: DNA topoisomerase 2 n=1 Tax=Nicotiana tabacum RepID=Q8GSC4_TOBAC 4.0e-10
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA topoisomerase 2 4.921e-32
Internal
sp_v3.0_unigene59075 SustainPine v3.0 410
• AutoFact: L-fucokinase/GDP-L-fucose pyrophosphorylase [Arabidopsis thaliana] sp|Q9LNJ9.2|FKGP_ARATH RecName: Full=Bifunctional fucokinase/fucose pyrophosphorylase; Short=AtFKGP; Includes: RecName: Full=L-fucokinase; Includes: RecName: Full=Fucose-1-phosphate guanyl 6.0e-17
• FL-Next: sp=Bifunctional fucokinase/fucose pyrophosphorylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene59657 SustainPine v3.0 292
• AutoFact: Elongation factor EF-2 n=2 Tax=Arabidopsis RepID=F4J2T9_ARATH 4.0e-25
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene60713 SustainPine v3.0 162
• AutoFact: 40S ribosomal protein S16 n=1 Tax=Fritillaria agrestis RepID=RS16_FRIAG 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S16 1.585e-25
Putative N-terminus
sp_v3.0_unigene61297 SustainPine v3.0 178
• AutoFact: Unassigned protein 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene62337 SustainPine v3.0 189
• AutoFact: PREDICTED: similar to elongation factor-2 n=1 Tax=Pan troglodytes RepID=UPI0000E24EAB 4.0e-28
• FL-Next: sp=Elongation factor 2; Beta vulgaris (Sugar beet). 0.0
• Sma3: Elongation factor 2 0.0
Internal
sp_v3.0_unigene62614 SustainPine v3.0 188
• AutoFact: Elongation factor 2 n=2 Tax=Chlorellales RepID=EF2_PARKE 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 4.951e-16
Internal
sp_v3.0_unigene62667 SustainPine v3.0 160
• AutoFact: DNA mismatch repair protein mlh1, putative n=1 Tax=Ricinus communis RepID=B9S712_RICCO 4.0e-14
• FL-Next: tr=DNA mismatch repair protein mlh1, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene62986 SustainPine v3.0 231
• AutoFact: Translation elongation factor, putative n=1 Tax=Ricinus communis RepID=B9RPP6_RICCO 8.0e-17
• FL-Next: tr=Translation elongation factor, putative; Ricinus communis (Castor bean). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain