Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S5 domain 2-type fold, subgroup

Term: IPR014721  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene31570 SustainPine v3.0 544
• AutoFact: 40S ribosomal protein S16 n=2 Tax=Trichinella spiralis RepID=E5SPV7_TRISP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S16 2.295e-36
Complete
sp_v3.0_unigene31854 SustainPine v3.0 449
• AutoFact: 40S ribosomal protein S16 n=3 Tax=Pleosporineae RepID=B2WDX9_PYRTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S16 1.955e-36
Putative Complete
sp_v3.0_unigene32057 SustainPine v3.0 779
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.716e-24
Internal
sp_v3.0_unigene32349 SustainPine v3.0 1095
• AutoFact: 40S ribosomal protein S16 n=22 Tax=Embryophyta RepID=RS16_GOSHI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene32753 SustainPine v3.0 719
• AutoFact: S16 n=1 Tax=Suberites domuncula RepID=Q4KTC5_SUBDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S16 1.294e-36
Complete
sp_v3.0_unigene34418 SustainPine v3.0 710
• AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 1.932e-19
N-terminus
sp_v3.0_unigene34533 SustainPine v3.0 392
• AutoFact: AAA-ATPase-like protein n=9 Tax=Poaceae RepID=Q8LKV4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Suppressor of K+ transport growth defect-like protein 5.85e-07
Internal
sp_v3.0_unigene34881 SustainPine v3.0 1904
• AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 0.0
Internal
sp_v3.0_unigene35111 SustainPine v3.0 453
• AutoFact: elongation factor EF-2 [Arabidopsis thaliana] gb|AAK32918.1|AF367331_1 At1g56070/T6H22_13 [Arabidopsis thaliana] gb|AAK96653.1| elongation factor EF-2 [Arabidopsis thaliana] gb|AAN31808.1| putative elongation factor [Arabidopsis thaliana] gb|AAN31864.1| p 1.4013e-45
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 3.832e-36
Internal
sp_v3.0_unigene37469 SustainPine v3.0 1896
• AutoFact: PWI multi-domain protein 4.0e-26
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Putative arginine/serine-rich protein 6.271e-09
Complete
sp_v3.0_unigene43293 SustainPine v3.0 222
• AutoFact: putative galactokinase protein [Olimarabidopsis pumila] 3.0e-23
• FL-Next: sp=L-arabinokinase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene45294 SustainPine v3.0 128
• AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: DNA mismatch repair and recombination 4.361e-09
Internal
sp_v3.0_unigene45961 SustainPine v3.0 2145
• AutoFact: homoserine kinase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homoserine kinase 9.115e-17
Complete
sp_v3.0_unigene46021 SustainPine v3.0 790
• AutoFact: 40S ribosomal protein S2 n=1 Tax=Picea abies RepID=Q9AVU0_PICAB 2.0e-36
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 2.544e-19
C-terminus
sp_v3.0_unigene46145 SustainPine v3.0 925
• AutoFact: Translation elongation factor, putative n=1 Tax=Ricinus communis RepID=B9RPP6_RICCO 1.0e-20
• FL-Next: sp=Elongation factor 2; Blastocystis hominis. 0.0
N-terminus
sp_v3.0_unigene46711 SustainPine v3.0 339
• AutoFact: DNA topoisomerase 2 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RWX5_PHYPA 5.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA topoisomerase 2 9.818e-26
N-terminus
sp_v3.0_unigene47780 SustainPine v3.0 722
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.921e-17
Internal
sp_v3.0_unigene47997 SustainPine v3.0 404
• AutoFact: RVT_2 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.086e-25
N-terminus
sp_v3.0_unigene50125 SustainPine v3.0 692
• AutoFact: Unassigned protein 6.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene50277 SustainPine v3.0 621
• AutoFact: L-fucokinase/GDP-L-fucose pyrophosphorylase [Arabidopsis thaliana] sp|Q9LNJ9.2|FKGP_ARATH RecName: Full=Bifunctional fucokinase/fucose pyrophosphorylase; Short=AtFKGP; Includes: RecName: Full=L-fucokinase; Includes: RecName: Full=Fucose-1-phosphate guanyl 0.0
• FL-Next: sp=Bifunctional fucokinase/fucose pyrophosphorylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain