Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Histone deacetylase

Term: IPR003084  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1120 SustainPine v3.0 2100
AutoFact: Histone deacetylase (Fragment) n=2 Tax=Malpighiales RepID=B9IEX4_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone deacetylase 0.0
Complete
sp_v3.0_unigene2381 SustainPine v3.0 1954
AutoFact: Histone deacetylase (Fragment) n=7 Tax=rosids RepID=D7SM47_VITVI 0.0
FL-Next: sp=Histone deacetylase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histone deacetylase 0.0
Complete
sp_v3.0_unigene3506 SustainPine v3.0 2695
AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr3 scaffold_8, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene7164 SustainPine v3.0 2086
AutoFact: Histone deacetylase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TG19_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone deacetylase 0.0
Complete
sp_v3.0_unigene60787 SustainPine v3.0 237
AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 2.0e-15
FL-Next: sp=Histone deacetylase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histone deacetylase 5.985e-09
Internal
sp_v3.0_unigene69573 SustainPine v3.0 183
AutoFact: Histone deacetylase n=2 Tax=Populus trichocarpa RepID=B9MZ37_POPTR 4.0e-17
FL-Next: sp=Histone deacetylase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histone deacetylase 4.747e-26
Internal
sp_v3.0_unigene154056 SustainPine v3.0 328
AutoFact: Histone deacetylase (Fragment) n=1 Tax=Nematostella vectensis RepID=A7RFA3_NEMVE 5.0e-37
FL-Next: sp=Histone deacetylase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histone deacetylase 1.39429e-42
Internal
sp_v3.0_unigene156729 SustainPine v3.0 511
AutoFact: Histone deacetylase family protein n=1 Tax=Dictyostelium fasciculatum RepID=F4PSW2_9MYCE 0.0
FL-Next: sp=Probable histone deacetylase 19; Zea mays (Maize). 0.0
Sma3: Histone deacetylase 1.21072e-42
Internal
sp_v3.0_unigene165513 SustainPine v3.0 239
AutoFact: Histone deacetylase (Fragment) n=7 Tax=rosids RepID=D7SM47_VITVI 4.0e-13
FL-Next: sp=Putative histone deacetylase 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene208272 SustainPine v3.0 596
AutoFact: Histone deacetylase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U4N6_VITVI 0.0
FL-Next: sp=Histone deacetylase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histone deacetylase 3.96708e-42
Internal
sp_v3.0_unigene208697 SustainPine v3.0 341
AutoFact: Histone deacetylase (Fragment) n=7 Tax=rosids RepID=D7SM47_VITVI 6.0e-25
FL-Next: sp=Histone deacetylase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Histone deacetylase 1.207e-15
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain