Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene40650 SustainPine v3.0 900
AutoFact: Pectinesterase n=1 Tax=Taiwania cryptomerioides RepID=B0L3S3_9CONI 0.0
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene41594 SustainPine v3.0 204
AutoFact: Probable pectate lyase 18 n=3 Tax=Arabidopsis RepID=PLY18_ARATH 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 2.442e-27
Internal
sp_v3.0_unigene42288 SustainPine v3.0 1694
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.022e-14
Putative N-terminus
sp_v3.0_unigene42321 SustainPine v3.0 2023
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana] gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana] gb|AEE86225.1| gl 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Polygalacturonase, putative 1.052e-21
Complete
sp_v3.0_unigene42674 SustainPine v3.0 468
AutoFact: pfam01535, PPR, PPR repeat 6.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.473e-18
Internal
sp_v3.0_unigene42846 SustainPine v3.0 306
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RCG6_RICCO 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase, putative 1.11e-10
Internal
sp_v3.0_unigene43577 SustainPine v3.0 242
AutoFact: Glycoside hydrolase, family 28 n=3 Tax=Andropogoneae RepID=B6TXJ8_MAIZE 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase, putative 2.512e-17
Internal
sp_v3.0_unigene43712 SustainPine v3.0 337
AutoFact: Pectate lyase, putative n=1 Tax=Ricinus communis RepID=B9RWM7_RICCO 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Putative N-terminus
sp_v3.0_unigene43838 SustainPine v3.0 864
AutoFact: Polygalacturonase n=1 Tax=Solanum lycopersicum RepID=Q9M7D3_SOLLC 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 0.0
C-terminus
sp_v3.0_unigene44325 SustainPine v3.0 487
AutoFact: Glycoside hydrolase, family 28 n=3 Tax=Andropogoneae RepID=B6TXJ8_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase, putative 8.732e-22
Internal
sp_v3.0_unigene44774 SustainPine v3.0 201
unknown
sp_v3.0_unigene45232 SustainPine v3.0 183
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 4.007e-11
Internal
sp_v3.0_unigene46151 SustainPine v3.0 775
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene46400 SustainPine v3.0 1182
AutoFact: Putative pectin methylesterase (Fragment) n=1 Tax=Picea abies RepID=A5X523_PICAB 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene47047 SustainPine v3.0 235
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene47522 SustainPine v3.0 1763
AutoFact: pectate lyase [Prunus persica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene47557 SustainPine v3.0 173
AutoFact: Pectase lyase n=2 Tax=Prunus persica RepID=D4NXR8_PRUPE 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 1.423e-37
Internal
sp_v3.0_unigene48084 SustainPine v3.0 1546
AutoFact: putative pectate lyase 18 [Arabidopsis thaliana] ref|NP_001190827.1| putative pectate lyase 18 [Arabidopsis thaliana] sp|Q9C5M8.2|PEL18_ARATH RecName: Full=Probable pectate lyase 18; AltName: Full=Pectate lyase A10; Flags: Precursor gb|AAW38990.1| At4g247 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Complete
sp_v3.0_unigene48438 SustainPine v3.0 317
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510 dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana] gb|AAT85758.1| At5g08510 [Arabido 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 5.078e-08
Internal
sp_v3.0_unigene48631 SustainPine v3.0 145
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RCG6_RICCO 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase, putative 2.086e-15
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain