Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene33675 SustainPine v3.0 484
AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 4.34e-37
C-terminus
sp_v3.0_unigene34261 SustainPine v3.0 731
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene34270 SustainPine v3.0 1211
AutoFact: Pectinesterase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SXF6_VITVI 0.0
FL-Next: sp=Pectinesterase 31; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pectinesterase 7.051e-35
Complete
sp_v3.0_unigene35268 SustainPine v3.0 2280
AutoFact: pectate lyase [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene35646 SustainPine v3.0 1633
AutoFact: pectate lyase [Prunus persica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene36769 SustainPine v3.0 1110
AutoFact: Pectinesterase (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=C4N552_MUSAC 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene37148 SustainPine v3.0 438
AutoFact: Unassigned protein 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene37365 SustainPine v3.0 389
AutoFact: Pectate lyase, putative n=1 Tax=Ricinus communis RepID=B9RAQ0_RICCO 6.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene37645 SustainPine v3.0 1038
AutoFact: putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine Rich Repeat, putative 1.097e-27
Internal
sp_v3.0_unigene37673 SustainPine v3.0 1498
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=D5AB84_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Putative Complete
sp_v3.0_unigene37750 SustainPine v3.0 1176
AutoFact: Putative receptor protein kinase [Oryza sativa Japonica Group] gb|AAP53098.1| Leucine Rich Repeat family protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine Rich Repeat, putative 3.249e-22
C-terminus
sp_v3.0_unigene37812 SustainPine v3.0 1589
AutoFact: pectate lyase 2 [Musa acuminata AAA Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Complete
sp_v3.0_unigene37824 SustainPine v3.0 1811
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PST8_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene38724 SustainPine v3.0 2148
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.7e-24
C-terminus
sp_v3.0_unigene38725 SustainPine v3.0 496
AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.496e-16
Internal
sp_v3.0_unigene40235 SustainPine v3.0 671
AutoFact: pectate lyase 2 [Musa acuminata AAA Group] 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene40489 SustainPine v3.0 881
AutoFact: Pectinesterase (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=C4N552_MUSAC 0.0
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene40490 SustainPine v3.0 461
AutoFact: Pectinesterase (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=C4N552_MUSAC 1.0e-35
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene40563 SustainPine v3.0 2220
AutoFact: Pectase lyase n=2 Tax=Prunus persica RepID=D4NXR8_PRUPE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Complete
sp_v3.0_unigene40564 SustainPine v3.0 1062
AutoFact: Probable pectate lyase 22 n=2 Tax=Arabidopsis RepID=PLY22_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain