Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene197146 SustainPine v3.0 191
AutoFact: Putative pectate-lyase (Fragment) n=1 Tax=Capsicum annuum RepID=Q8S345_CAPAN 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 7.585e-37
Internal
sp_v3.0_unigene197312 SustainPine v3.0 395
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9P2L6_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene200595 SustainPine v3.0 580
AutoFact: pectate lyase-like protein [Arabidopsis thaliana] 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pectate lyase 5.186e-07
Putative C-terminus
sp_v3.0_unigene202091 SustainPine v3.0 647
AutoFact: Putative pectate lyase 14 n=4 Tax=Arabidopsis RepID=PLY14_ARATH 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 1.068e-17
Internal
sp_v3.0_unigene203548 SustainPine v3.0 363
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 9.0e-29
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene203569 SustainPine v3.0 631
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NVV0_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene204391 SustainPine v3.0 310
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RPV5_RICCO 4.0e-38
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene206226 SustainPine v3.0 357
AutoFact: pectate lyase [Prunus persica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene208696 SustainPine v3.0 343
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 7.00649e-45
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene209590 SustainPine v3.0 921
AutoFact: pectate lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pectate lyase 7.793e-07
C-terminus
sp_v3.0_unigene210072 SustainPine v3.0 319
AutoFact: Probable pectinesterase/pectinesterase inhibitor 20 n=2 Tax=Arabidopsis RepID=PME20_ARATH 1.0e-16
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
C-terminus
sp_v3.0_unigene210233 SustainPine v3.0 517
AutoFact: pectate lyase [Gossypium hirsutum] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 9.29495e-41
C-terminus
sp_v3.0_unigene210287 SustainPine v3.0 449
AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene210472 SustainPine v3.0 124
AutoFact: Putative pectate-lyase (Fragment) n=1 Tax=Capsicum annuum RepID=Q8S345_CAPAN 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 8.628e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain