Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Glycoside hydrolase, family 28

Term: IPR000743  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene137252 SustainPine v3.0 322
AutoFact: Glycoside hydrolase, family 28 n=3 Tax=Andropogoneae RepID=B6TXJ8_MAIZE 5.99994e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase, putative 4.576e-22
Internal
sp_v3.0_unigene137379 SustainPine v3.0 511
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RCG6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase, putative 4.561e-15
Internal
sp_v3.0_unigene141682 SustainPine v3.0 671
AutoFact: shaggy-related protein kinase 1 [Physcomitrella patens] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycogen synthase kinase-3 beta, putative 5.001e-20
Putative C-terminus
sp_v3.0_unigene144203 SustainPine v3.0 518
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.284e-31
Internal
sp_v3.0_unigene144599 SustainPine v3.0 534
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene148177 SustainPine v3.0 472
AutoFact: polygalacturonase precursor [Glycine max] 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 8.13e-11
C-terminus
sp_v3.0_unigene149169 SustainPine v3.0 164
AutoFact: Glycoside hydrolase, family 28 n=1 Tax=Medicago truncatula RepID=Q2HVV9_MEDTR 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 2.2e-29
Internal
sp_v3.0_unigene154132 SustainPine v3.0 497
AutoFact: Glycosyl hydrolase family 28 n=1 Tax=Glomerella graminicola M1.001 RepID=E3QWZ6_COLGM 0.0
FL-Next: sp=Polygalacturonase; Juniperus ashei (Ozark white cedar). 0.0
Internal
sp_v3.0_unigene155102 SustainPine v3.0 275
AutoFact: Glyco_hydro_28 domain containing protein 1.0e-05
FL-Next: tr=Predicted protein; Phaeodactylum tricornutum (strain CCAP 1055/1). 0.0
Internal
sp_v3.0_unigene157536 SustainPine v3.0 192
AutoFact: Polygalacturonase n=1 Tax=Persea americana RepID=PGLR_PERAE 2.0e-10
FL-Next: tr=Allergen Cry j 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Internal
sp_v3.0_unigene157663 SustainPine v3.0 359
AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.433e-30
Internal
sp_v3.0_unigene158461 SustainPine v3.0 292
AutoFact: polygalacturonase PG1-like [Oryza sativa Japonica Group] dbj|BAD68939.1| polygalacturonase PG1-like [Oryza sativa Japonica Group] 7.0e-35
FL-Next: sp=Polygalacturonase; Juniperus ashei (Ozark white cedar). 0.0
Sma3: Polygalacturonase 8.815e-16
Internal
sp_v3.0_unigene160171 SustainPine v3.0 330
AutoFact: putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene161370 SustainPine v3.0 208
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 1.0e-26
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene161497 SustainPine v3.0 247
AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 2.0e-35
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Transposon protein, putative, unclassified 7.069e-08
Internal
sp_v3.0_unigene163794 SustainPine v3.0 308
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9TA63_RICCO 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polygalacturonase 3.283e-06
Internal
sp_v3.0_unigene163963 SustainPine v3.0 296
AutoFact: Glycoside hydrolase, family 28 n=3 Tax=Andropogoneae RepID=B6TXJ8_MAIZE 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polygalacturonase 1.487e-19
Internal
sp_v3.0_unigene165729 SustainPine v3.0 420
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.107e-36
Internal
sp_v3.0_unigene168171 SustainPine v3.0 279
AutoFact: Contains similarity to a polygalacturonase-like protein gi|7529266 from Arabidopsis thaliana BAC F18P9 gb|AL138654 and contains multiple polygalacturonase (pectinase) PF|00295 domains 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polygalacturonase 2.66e-19
Internal
sp_v3.0_unigene185122 SustainPine v3.0 481
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana] gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana] 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain