Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chaperonin TCP-1, conserved site

Term: IPR002194  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene48400 SustainPine v3.0 180
AutoFact: ATP binding protein, putative (EC:2.7.11.25) 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_57, whole genome shotgun sequence 1.051e-09
Internal
sp_v3.0_unigene49115 SustainPine v3.0 262
AutoFact: ATP binding protein, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9SLN9_RICCO 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr10 scaffold_81, whole genome shotgun sequence 9.894e-13
Internal
sp_v3.0_unigene50303 SustainPine v3.0 879
AutoFact: kinase domain-containing protein [Arabidopsis thaliana] gb|AAL24403.1| Unknown protein [Arabidopsis thaliana] gb|AAN15471.1| Unknown protein [Arabidopsis thaliana] gb|AEE29481.1| kinase domain-containing protein [Arabidopsis thaliana] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-protein kinase receptor 5.071e-11
C-terminus
sp_v3.0_unigene51429 SustainPine v3.0 718
AutoFact: T-complex protein 1 subunit delta n=2 Tax=Selaginella moellendorffii RepID=D8QXT8_SELML 0.0
FL-Next: sp=T-complex protein 1 subunit delta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: T-complex protein 1, delta subunit 4.039e-39
Putative Complete
sp_v3.0_unigene51581 SustainPine v3.0 719
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyprotein, putative 6.745e-11
Internal
sp_v3.0_unigene51589 SustainPine v3.0 425
AutoFact: kinase domain-containing protein [Arabidopsis thaliana] gb|AAL24403.1| Unknown protein [Arabidopsis thaliana] gb|AAN15471.1| Unknown protein [Arabidopsis thaliana] gb|AEE29481.1| kinase domain-containing protein [Arabidopsis thaliana] 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-protein kinase receptor 3.811e-13
Internal
sp_v3.0_unigene52661 SustainPine v3.0 283
AutoFact: putative receptor-like protein kinase [Oryza sativa Japonica Group] 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-protein kinase receptor 8.782e-11
Internal
sp_v3.0_unigene52927 SustainPine v3.0 351
AutoFact: SIT4 phosphatase-associated protein (Fragment) n=1 Tax=Picea abies RepID=B2KZI6_PICAB 1.0e-39
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene54150 SustainPine v3.0 108
AutoFact: Os07g0528100 protein (Fragment) n=3 Tax=Oryza sativa Japonica Group RepID=Q0D5X2_ORYSJ 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene55941 SustainPine v3.0 289
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHT5_ARATH 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.267e-11
Putative N-terminus
sp_v3.0_unigene56418 SustainPine v3.0 170
AutoFact: Patched family protein n=1 Tax=Arabidopsis thaliana RepID=F4JTN1_ARATH 1.0e-09
FL-Next: tr=Putative uncharacterized protein AT4g38350; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cholesterol transport protein 1.777e-09
Internal
sp_v3.0_unigene56576 SustainPine v3.0 358
AutoFact: PREDICTED: similar to patched family protein n=1 Tax=Vitis vinifera RepID=UPI0001985140 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Cholesterol transport protein 2.643e-09
Putative C-terminus
sp_v3.0_unigene56803 SustainPine v3.0 426
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.146e-30
Internal
sp_v3.0_unigene56913 SustainPine v3.0 474
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.41e-27
N-terminus
sp_v3.0_unigene58231 SustainPine v3.0 425
AutoFact: T complex protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: T-complex protein 1 subunit epsilon 7.447e-12
N-terminus
sp_v3.0_unigene58662 SustainPine v3.0 173
AutoFact: Cholesterol transport protein n=1 Tax=Populus trichocarpa RepID=B9HPX9_POPTR 6.0e-07
FL-Next: tr=Cholesterol transport protein; subsp. trichocarpa). 0.0
Sma3: Cholesterol transport protein 5.586e-10
Internal
sp_v3.0_unigene58828 SustainPine v3.0 398
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SF98_RICCO 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-protein kinase receptor 8.889e-12
Internal
sp_v3.0_unigene58947 SustainPine v3.0 198
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene58993 SustainPine v3.0 256
AutoFact: TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] gb|AAO22566.1| putative chaperonin gamma chain [Arabidopsis thaliana] gb|AED93554.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene59117 SustainPine v3.0 169
AutoFact: pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum 1.0e-17
FL-Next: sp=Probable LRR receptor-like serine/threonine-protein kinase At1g56140; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.629e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain