Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chaperonin TCP-1, conserved site

Term: IPR002194  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene189965 SustainPine v3.0 351
AutoFact: Chaperonin containing TCP1 zeta subunit n=1 Tax=Polysphondylium pallidum RepID=D3BK16_POLPA 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene190207 SustainPine v3.0 408
AutoFact: CCT chaperonin theta subunit n=1 Tax=Physarum polycephalum RepID=Q8WSY4_PHYPO 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene190396 SustainPine v3.0 376
AutoFact: Chaperonin containing TCP1, subunit 8 (Theta) n=4 Tax=Clupeocephala RepID=Q6TNV4_DANRE 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene190884 SustainPine v3.0 336
AutoFact: F6N18.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LPK1_ARATH 9.0e-31
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Copia-type polyprotein 1.692e-10
Putative C-terminus
sp_v3.0_unigene191280 SustainPine v3.0 324
AutoFact: Chaperonin containing TCP1 eta subunit n=1 Tax=Polysphondylium pallidum RepID=D3BPJ6_POLPA 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: T-complex protein 1, alpha subunit 4.265e-24
N-terminus
sp_v3.0_unigene197012 SustainPine v3.0 218
AutoFact: Putative receptor protein kinase n=1 Tax=Oryza sativa Japonica Group RepID=Q8S3P8_ORYSJ 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.084e-12
Internal
sp_v3.0_unigene197114 SustainPine v3.0 284
AutoFact: Probable G2/mitotic-specific cyclin (Fragment) n=1 Tax=Picea mariana RepID=O65064_PICMA 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CycB2 2.064e-16
Putative C-terminus
sp_v3.0_unigene201336 SustainPine v3.0 367
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.76564e-43
Internal
sp_v3.0_unigene201400 SustainPine v3.0 710
AutoFact: Very similar to receptor-like serine/threonine kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 2.315e-13
Putative C-terminus
sp_v3.0_unigene202024 SustainPine v3.0 469
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 9.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.053e-22
Internal
sp_v3.0_unigene202674 SustainPine v3.0 672
AutoFact: RecName: Full=T-complex protein 1 subunit epsilon; Short=TCP-1-epsilon; AltName: Full=CCT-epsilon; AltName: Full=TCP-K19 emb|CAA53396.1| T complex polypeptide 1 [Avena sativa] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: T-complex protein 1 subunit epsilon 8.064e-12
C-terminus
sp_v3.0_unigene209232 SustainPine v3.0 208
AutoFact: Chaperonin protein n=6 Tax=Poaceae RepID=Q6ASR1_ORYSJ 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain