Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chaperonin TCP-1, conserved site

Term: IPR002194  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene108714 SustainPine v3.0 312
• AutoFact: CRS2-associated factor 2, chloroplastic n=2 Tax=Arabidopsis RepID=CAF2P_ARATH 1.0e-38
• FL-Next: sp=CRS2-associated factor 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2 1.134e-12
Internal
sp_v3.0_unigene109443 SustainPine v3.0 384
• AutoFact: Hedgehog receptor, putative n=1 Tax=Ricinus communis RepID=B9R8N7_RICCO 2.0e-27
• FL-Next: tr=Hedgehog receptor, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Cholesterol transport protein 7.315e-10
Internal
sp_v3.0_unigene111790 SustainPine v3.0 748
• AutoFact: putative receptor-like protein kinase [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.357e-12
Putative Complete
sp_v3.0_unigene112466 SustainPine v3.0 456
• AutoFact: cysteine-rich receptor-like protein kinase 2 [Arabidopsis thaliana] sp|Q9CAL3.1|CRK2_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 2; Short=Cysteine-rich RLK2; Flags: Precursor gb|AAG52471.1|AC010796_10 putative protein kinase; 37247-3480 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 3.298e-09
Internal
sp_v3.0_unigene112903 SustainPine v3.0 456
• AutoFact: cyclin A [Scutellaria baicalensis] 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cyclin 1.329e-29
Internal
sp_v3.0_unigene113848 SustainPine v3.0 529
• AutoFact: Probable G2/mitotic-specific cyclin (Fragment) n=1 Tax=Picea mariana RepID=O65064_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CycB2 2.365e-22
C-terminus
sp_v3.0_unigene114712 SustainPine v3.0 467
• AutoFact: Activator_LAG-3 multi-domain protein 4.0e-11
coding
sp_v3.0_unigene114744 SustainPine v3.0 449
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 7.17e-07
Internal
sp_v3.0_unigene118392 SustainPine v3.0 388
• AutoFact: Cysteine-rich receptor-like protein kinase 28 n=2 Tax=Arabidopsis thaliana RepID=F4JJI2_ARATH 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr19 scaffold_4, whole genome shotgun sequence 7.098e-15
Internal
sp_v3.0_unigene119698 SustainPine v3.0 316
• AutoFact: ATP binding protein, putative (EC:2.7.11.25) 2.0e-17
• FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.815e-10
Internal
sp_v3.0_unigene119766 SustainPine v3.0 428
• AutoFact: Protein kinase family protein n=1 Tax=Glycine max RepID=C6ZRR0_SOYBN 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase receptor 2.318e-11
Internal
sp_v3.0_unigene121009 SustainPine v3.0 258
• AutoFact: pfam12799, LRR_4, Leucine Rich repeats (2 copies) 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr12 scaffold_57, whole genome shotgun sequence 1.195e-07
Putative C-terminus
sp_v3.0_unigene121257 SustainPine v3.0 443
• AutoFact: receptor protein kinase, putative [Arabidopsis thaliana] 6.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_302, whole genome shotgun sequence 4.861e-11
Internal
sp_v3.0_unigene123890 SustainPine v3.0 244
• AutoFact: protein kinase, putative [Musa balbisiana] 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.282e-12
Internal
sp_v3.0_unigene125273 SustainPine v3.0 302
• AutoFact: Protein kinase n=4 Tax=Andropogoneae RepID=B6SY15_MAIZE 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 8.681e-13
Internal
sp_v3.0_unigene127103 SustainPine v3.0 1047
• AutoFact: T-complex protein 1 subunit alpha n=5 Tax=Poaceae RepID=Q7FAT6_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1, alpha subunit 5.60519e-45
Complete
sp_v3.0_unigene128180 SustainPine v3.0 662
• AutoFact: Protein kinase family protein n=1 Tax=Glycine max RepID=C6ZRR0_SOYBN 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase receptor 2.64e-17
C-terminus
sp_v3.0_unigene129333 SustainPine v3.0 236
• AutoFact: Activator_LAG-3 multi-domain protein 7.0e-12
coding
sp_v3.0_unigene129548 SustainPine v3.0 425
• AutoFact: T complex protein 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 9.398e-12
N-terminus
sp_v3.0_unigene129858 SustainPine v3.0 489
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.708e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain