Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein modification process

Term: GO:0006464  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene208538 SustainPine v3.0 318
AutoFact: Actin (Fragment) n=2 Tax=core eudicotyledons RepID=E3UU95_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-like protein 9.763e-07
N-terminus
sp_v3.0_unigene209202 SustainPine v3.0 589
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 1.003e-07
Putative Complete
sp_v3.0_unigene209857 SustainPine v3.0 527
AutoFact: nuclear protein localization protein 4-like protein [Arabidopsis thaliana] sp|Q9LYC2.1|NPL41_ARATH RecName: Full=NPL4-like protein 1 emb|CAB87745.1| putative protein [Arabidopsis thaliana] gb|AAK59569.1| unknown protein [Arabidopsis thaliana] gb|AAL07248. 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NPL4 family protein 1.019e-09
C-terminus
sp_v3.0_unigene210157 SustainPine v3.0 279
AutoFact: 60S ribosomal protein L40 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KFB8_PUCGT 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene210165 SustainPine v3.0 421
AutoFact: Actin (Fragment) n=4 Tax=Spermatophyta RepID=ACT_PINCO 0.0
FL-Next: tr=Uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Actin 2.274e-22
Complete
sp_v3.0_unigene210222 SustainPine v3.0 569
AutoFact: NPL4-like protein 2 [Arabidopsis thaliana] sp|O82264.1|NPL42_ARATH RecName: Full=NPL4-like protein 2 gb|AAC63651.1| expressed protein [Arabidopsis thaliana] gb|AAM15128.1| expressed protein [Arabidopsis thaliana] gb|ABG89130.1| NPL4b [synthetic construct] 0.0
FL-Next: Isoform 2 of NPL4-like protein 2 OS=Arabidopsis thaliana GN=At2g47970 0.0
Sma3: NPL4 family protein 1.248e-09
Putative N-terminus
sp_v3.0_unigene210327 SustainPine v3.0 1043
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin, putative 4.51e-07
Putative N-terminus
sp_v3.0_unigene210341 SustainPine v3.0 764
AutoFact: Polyubiquitin (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y36_OSTTA 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 1.014e-07
Putative Complete
sp_v3.0_unigene210354 SustainPine v3.0 908
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin fusion protein 0.0
Complete
sp_v3.0_unigene210357 SustainPine v3.0 1425
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin 0.0
Complete
sp_v3.0_unigene210494 SustainPine v3.0 161
AutoFact: Ubiquitin/ribosomal fusion protein n=2 Tax=Ajellomyces dermatitidis RepID=F2TQT1_AJEDE 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin 2.996e-10
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain