Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ubiquitin-dependent protein catabolic process

Term: GO:0006511  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene15688 SustainPine v3.0 587
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 4.269e-09
Putative C-terminus
sp_v3.0_unigene15758 SustainPine v3.0 440
• AutoFact: Ubiquitin-conjugating enzyme E2-16 kDa n=48 Tax=Fungi/Metazoa group RepID=UBC1_MAGO7 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 2.36e-14
Putative N-terminus
sp_v3.0_unigene15799 SustainPine v3.0 1283
• AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 9.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene16083 SustainPine v3.0 1189
• AutoFact: Ubiquitin carrier protein (Fragment) n=2 Tax=Magnoliophyta RepID=Q677E9_HYAOR 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.054e-16
Putative Complete
sp_v3.0_unigene16219 SustainPine v3.0 920
• AutoFact: Ubiquitin specific protease 39 and snrnp assembly factor, putative n=1 Tax=Ricinus communis RepID=B9S3J3_RICCO 0.0
• FL-Next: sp=Putative ubiquitin carboxyl-terminal hydrolase 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene16636 SustainPine v3.0 1702
• AutoFact: cullin 3 [Arabidopsis thaliana] sp|Q9ZVH4.1|CUL3A_ARATH RecName: Full=Cullin-3A; Short=AtCUL3a gb|AAF87034.1|AC006535_12 T24P13.25 [Arabidopsis thaliana] gb|AAD14503.1| Highly similar to cullin 3 [Arabidopsis thaliana] emb|CAC87120.1| cullin 3a [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin 4.85e-21
C-terminus
sp_v3.0_unigene16668 SustainPine v3.0 381
• AutoFact: Receptor protein kinase zmpk1, putative n=1 Tax=Ricinus communis RepID=B9SV42_RICCO 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine-threonine protein kinase, plant-type, putative 4.098e-06
Internal
sp_v3.0_unigene16676 SustainPine v3.0 683
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.287e-15
Internal
sp_v3.0_unigene16703 SustainPine v3.0 403
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.144e-11
Internal
sp_v3.0_unigene16884 SustainPine v3.0 672
• AutoFact: cullin 3-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin 3.133e-14
C-terminus
sp_v3.0_unigene16995 SustainPine v3.0 2025
• AutoFact: Atrophin-1 multi-domain protein 6.0e-39
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Extensin 6.007e-36
C-terminus
sp_v3.0_unigene17082 SustainPine v3.0 1268
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NK23_PICSI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene17204 SustainPine v3.0 1284
• AutoFact: Proteasome subunit beta type n=1 Tax=Picea sitchensis RepID=A9NKA9_PICSI 0.0
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17372 SustainPine v3.0 775
• AutoFact: [R] COG5091 Suppressor of G2 allele of skp1 and related proteins 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SGT1 1.406e-14
Putative Complete
sp_v3.0_unigene17431 SustainPine v3.0 2111
• AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NYS4_PICSI 0.0
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17445 SustainPine v3.0 1448
• AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 7.0e-15
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Extensin 1.447e-36
Putative C-terminus
sp_v3.0_unigene17473 SustainPine v3.0 1414
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NPU7_PICSI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene17581 SustainPine v3.0 1175
• AutoFact: ubiquitin C-terminal hydrolase 3 [Arabidopsis thaliana] dbj|BAC43488.1| putative carboxyl-terminal proteinase [Arabidopsis thaliana] gb|AAO63908.1| putative carboxyl-terminal proteinase [Arabidopsis thaliana] gb|AEE83905.1| ubiquitin C-terminal hydrolase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17651 SustainPine v3.0 1367
• AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NYS4_PICSI 0.0
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17783 SustainPine v3.0 1814
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5ADG8_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 4.213e-38
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain