Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ubiquitin-dependent protein catabolic process

Term: GO:0006511  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene12349 SustainPine v3.0 765
AutoFact: Unassigned protein
FL-Next: sp=EPIDERMAL PATTERNING FACTOR-like protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene12406 SustainPine v3.0 1904
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9SNV7_RICCO 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 6.053e-18
Putative Complete
sp_v3.0_unigene12492 SustainPine v3.0 966
AutoFact: ubiquitin carboxyl-terminal hydrolase 17 [Arabidopsis thaliana] sp|Q9FKP5.1|UBP17_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17; AltName: Full=Deubiquitinating enzyme 17; Short=AtUBP17; AltName: Full=Ubiquitin thiolesterase 17; AltName: Ful 2.0e-11
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana GN=UBP17 0.0
Putative N-terminus
sp_v3.0_unigene12842 SustainPine v3.0 2076
AutoFact: PREDICTED: SINA2p isoform 2 [Vitis vinifera] ref|XP_002280243.1| PREDICTED: SINA2p isoform 1 [Vitis vinifera] emb|CAB40578.1| SINA2p [Vitis vinifera] emb|CBI29998.3| unnamed protein product [Vitis vinifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene13170 SustainPine v3.0 1294
AutoFact: Amino acid transporter n=2 Tax=Solanum RepID=Q8GZV3_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Amino acid permease 0.0
Internal
sp_v3.0_unigene13223 SustainPine v3.0 1123
AutoFact: Ubiquitin fusion degradation protein n=1 Tax=Elaeis guineensis RepID=B3TLZ5_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin fusion degradation protein 1 4.17e-09
C-terminus
sp_v3.0_unigene13355 SustainPine v3.0 477
AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] ref|NP_001031455.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|AAD20674.1| hypothetical protein [Arabidopsis thaliana] gb|AAL67006.1| unknown prote 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene13492 SustainPine v3.0 1144
AutoFact: ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome) [Xenopus (Silurana) tropicalis] gb|AAH67999.1| ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome) [Xenopus (Silurana) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin-protein ligase 1.248e-09
C-terminus
sp_v3.0_unigene13761 SustainPine v3.0 1216
AutoFact: CAF protein n=17 Tax=Camelineae RepID=Q56Y50_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dicer-like protein 1.025e-12
Complete
sp_v3.0_unigene13924 SustainPine v3.0 949
AutoFact: RecName: Full=Histone-lysine N-methyltransferase ASHH2; AltName: Full=ASH1 homolog 2; AltName: Full=H3-K4-HMTase; AltName: Full=Histone H3-K36 methyltransferase 8; Short=H3-K36-HMTase 8; AltName: Full=Protein EARLY FLOWERING IN SHORT DAYS; AltName: Full=P 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 4.218e-13
Putative C-terminus
sp_v3.0_unigene13945 SustainPine v3.0 399
AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] ref|NP_001031455.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|AAD20674.1| hypothetical protein [Arabidopsis thaliana] gb|AAL67006.1| unknown prote 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene14040 SustainPine v3.0 984
AutoFact: ubiquitin thiolesterase [Arabidopsis thaliana] gb|AAL06935.1| AT3g58520/F14P22_110 [Arabidopsis thaliana] gb|AAM91040.1| AT3g58520/F14P22_110 [Arabidopsis thaliana] gb|AEE79794.1| ubiquitin thiolesterase [Arabidopsis thaliana] 8.0e-17
FL-Next: tr=Os04g0546100 protein; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
sp_v3.0_unigene14209 SustainPine v3.0 1615
AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] emb|CAB87754.1| putative protein [Arabidopsis thaliana] gb|AAM20723.1| putative protein [Arabidopsis thaliana] gb|AAN15634.1| putative protein [Arabidopsis thaliana] gb|AEE80434.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene14694 SustainPine v3.0 901
AutoFact: ubiquitin thiolesterase [Arabidopsis thaliana] gb|AAL06935.1| AT3g58520/F14P22_110 [Arabidopsis thaliana] gb|AAM91040.1| AT3g58520/F14P22_110 [Arabidopsis thaliana] gb|AEE79794.1| ubiquitin thiolesterase [Arabidopsis thaliana] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Putative N-terminus
sp_v3.0_unigene14754 SustainPine v3.0 1762
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NLJ2_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene14759 SustainPine v3.0 3337
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Sma3: TIR1-like protein 9.664e-20
Complete
sp_v3.0_unigene14776 SustainPine v3.0 1686
AutoFact: ubiquitin thiolesterase [Arabidopsis thaliana] gb|AAQ65163.1| At4g08940 [Arabidopsis thaliana] dbj|BAD43049.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82698.1| ubiquitin thiolesterase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene15294 SustainPine v3.0 532
AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|AAC17048.1| Contains similarity to membrane associated salt-inducible protein gb|AF007269 from A. thaliana [Arabidopsis thaliana] gb|AAV63862.1| hypothetical protein At1g79120 [A 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene15619 SustainPine v3.0 1112
AutoFact: Unassigned protein
FL-Next: sp=Putative E3 ubiquitin-protein ligase RF298; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene15687 SustainPine v3.0 1287
AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NP38_PICSI 0.0
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain