Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ubiquitin-dependent protein catabolic process

Term: GO:0006511  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene203960 SustainPine v3.0 454
• AutoFact: CSN complex subunit 6A [Arabidopsis thaliana] 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: COP9 signalosome complex subunit 6a 1.521e-13
C-terminus
sp_v3.0_unigene204318 SustainPine v3.0 316
• AutoFact: DUF659 domain containing protein 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene204648 SustainPine v3.0 376
• AutoFact: Ubiquitin carrier protein n=1 Tax=Branchiostoma floridae RepID=C3YPF5_BRAFL 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
C-terminus
sp_v3.0_unigene205517 SustainPine v3.0 293
• AutoFact: Rab GTPase n=1 Tax=Dictyostelium fasciculatum RepID=F4PJV4_9MYCE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 2.899e-16
Internal
sp_v3.0_unigene205518 SustainPine v3.0 395
• AutoFact: Plastid CUL1 n=1 Tax=Hevea brasiliensis RepID=D8V3L8_HEVBR 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cullin 7.768e-08
C-terminus
sp_v3.0_unigene205534 SustainPine v3.0 484
• AutoFact: Ubiquitin-conjugating enzyme E2 n=1 Tax=Dictyostelium fasciculatum RepID=F4Q0Q7_9MYCE 0.0
• FL-Next: tr=Putative ubiquitin conjugating enzyme; Pinus resinosa (Red pine) (Norway pine). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene205626 SustainPine v3.0 233
• AutoFact: Extensin_2 multi-domain protein 8.0e-25
• Sma3: Extensin 0.0
coding
sp_v3.0_unigene205836 SustainPine v3.0 436
• AutoFact: Ubiquitin carrier protein n=1 Tax=Arachis hypogaea RepID=Q5UAG0_ARAHY 4.0e-23
• FL-Next: tr=Putative ubiquitin conjugating enzyme; Pinus resinosa (Red pine) (Norway pine). 0.0
• Sma3: Ubiquitin carrier protein 0.0
C-terminus
sp_v3.0_unigene205921 SustainPine v3.0 532
• AutoFact: DUF659 domain containing protein 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Transposase-like protein 3.668e-06
Internal
sp_v3.0_unigene206076 SustainPine v3.0 230
• AutoFact: DUF659 domain containing protein 7.0e-20
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus
sp_v3.0_unigene206618 SustainPine v3.0 646
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U1S0_PHYPA 2.0e-13
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene207127 SustainPine v3.0 736
• AutoFact: DUF659 domain containing protein 7.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene207175 SustainPine v3.0 776
• AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 1.0e-15
• FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
• Sma3: 36.4 kDa proline-rich protein 1.472e-13
Complete
sp_v3.0_unigene207365 SustainPine v3.0 720
• AutoFact: Proline-rich-like protein n=1 Tax=Asparagus officinalis RepID=Q96232_ASPOF 5.0e-34
• FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
• Sma3: 36.4 kDa proline-rich protein 4.42e-10
Complete
sp_v3.0_unigene208457 SustainPine v3.0 370
• AutoFact: Histone H3 (Fragment) n=1 Tax=Solenopsis invicta RepID=E9IYV7_SOLIN 0.0
• FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H3 1.7264e-42
Putative Complete
sp_v3.0_unigene208502 SustainPine v3.0 809
• AutoFact: Proteasome subunit beta type-3 n=2 Tax=Picea RepID=PSB3_PICMA 0.0
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene208515 SustainPine v3.0 263
• AutoFact: Enolase n=3 Tax=Picea sitchensis RepID=B8LL07_PICSI 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Enolase 0.0
Internal
sp_v3.0_unigene208586 SustainPine v3.0 541
• AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cullin protein 3.22e-12
Internal
sp_v3.0_unigene208813 SustainPine v3.0 101
• AutoFact: Enolase n=3 Tax=Picea sitchensis RepID=B8LL07_PICSI 2.0e-10
• FL-Next: sp=Enolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Enolase 0.0
Internal
sp_v3.0_unigene209113 SustainPine v3.0 346
• AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 5.00264e-43
• FL-Next: sp=Histone H3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H3 4.247e-29
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain