Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote

Term: IPR015940  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene53594 SustainPine v3.0 388
AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 2.0e-34
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene54526 SustainPine v3.0 244
AutoFact: Ubiquitin-conjugating enzyme E2 35 n=42 Tax=Embryophyta RepID=UBC35_ARATH 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 0.0
Internal
sp_v3.0_unigene54731 SustainPine v3.0 287
AutoFact: E3 ubiquitin protein ligase upl2, putative n=1 Tax=Ricinus communis RepID=B9S9V5_RICCO 5.0e-11
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene56591 SustainPine v3.0 102
AutoFact: Putative DNA repair protein n=1 Tax=Ipomoea trifida RepID=Q6JJ38_IPOTF 5.0e-11
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA repair helicase rad5,16, putative 2.361e-07
Internal
sp_v3.0_unigene57020 SustainPine v3.0 390
AutoFact: 5-AMP-activated protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SVJ9_RICCO 1.0e-19
FL-Next: Isoform 2 of SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thaliana GN=KIN11 0.0
Sma3: SNF1-related protein kinase 1.356e-18
N-terminus
sp_v3.0_unigene57242 SustainPine v3.0 377
AutoFact: 5-AMP-activated protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SVJ9_RICCO 1.0e-18
FL-Next: Isoform 2 of SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thaliana GN=KIN11 0.0
Sma3: SNF1-related protein kinase 1.356e-18
N-terminus
sp_v3.0_unigene57585 SustainPine v3.0 259
AutoFact: Putative DNA cytosine 5-methyltransferase n=1 Tax=Solanum lycopersicum RepID=B0FPD7_SOLLC 3.0e-22
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative DNA cytosine methyltransferase Zmet3 2.544e-08
Putative C-terminus
sp_v3.0_unigene59574 SustainPine v3.0 275
AutoFact: DEA(D/H)-box RNA helicase family protein n=4 Tax=Arabidopsis RepID=F4HYJ6_ARATH 2.0e-40
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.605e-13
Internal
sp_v3.0_unigene60214 SustainPine v3.0 298
AutoFact: elongation factor Ts family protein [Arabidopsis thaliana] emb|CAB43920.1| putative protein [Arabidopsis thaliana] emb|CAB79664.1| putative protein [Arabidopsis thaliana] gb|AAL10483.1| AT4g29060/F19B15_90 [Arabidopsis thaliana] gb|AEE85580.1| elongation 3.0e-16
FL-Next: sp=Elongation factor Ts, chloroplastic; Rhodomonas salina (Cryptomonas salina). Plastid; Chloroplast. 0.0
Sma3: Elongation factor Ts 2.317e-17
Putative N-terminus
sp_v3.0_unigene61208 SustainPine v3.0 232
AutoFact: Ubiquitin-protein ligase, UPL1 n=2 Tax=Selaginella moellendorffii RepID=D8T159_SELML 5.0e-12
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene61249 SustainPine v3.0 138
AutoFact: Putative DNA cytosine methyltransferase Zmet3 n=1 Tax=Oryza sativa Japonica Group RepID=Q8H7W0_ORYSJ 4.0e-13
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA methyltransferase 7.961e-10
Internal
sp_v3.0_unigene62181 SustainPine v3.0 214
AutoFact: putative helicase [Oryza sativa Japonica Group] 7.0e-31
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative RNA helicase A 2.414e-11
Internal
sp_v3.0_unigene63019 SustainPine v3.0 235
AutoFact: E3 ubiquitin protein ligase upl2, putative n=1 Tax=Ricinus communis RepID=B9S9V5_RICCO 3.0e-17
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene64795 SustainPine v3.0 142
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene65345 SustainPine v3.0 152
AutoFact: putative DNA repair protein RAD23-3 [Arabidopsis thaliana] sp|Q84L31.2|RD23C_ARATH RecName: Full=Putative DNA repair protein RAD23-3; AltName: Full=RAD23-like protein 3; Short=AtRAD23-3 gb|AAF32461.1| putative RAD23 [Arabidopsis thaliana] gb|AAK62617.1| A 5.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene67996 SustainPine v3.0 412
AutoFact: Putative DNA repair protein n=1 Tax=Ipomoea trifida RepID=Q6JJ38_IPOTF 2.0e-11
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene68604 SustainPine v3.0 350
AutoFact: DRM-type DNA-methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTT0_ELAGV 2.0e-31
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA methyltransferase 4.404e-10
Internal
sp_v3.0_unigene68735 SustainPine v3.0 253
AutoFact: DNA repair helicase rad5,16, putative n=1 Tax=Ricinus communis RepID=B9STJ2_RICCO 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA repair helicase rad5,16, putative 2.683e-07
Internal
sp_v3.0_unigene69120 SustainPine v3.0 191
AutoFact: Unassigned protein 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene69877 SustainPine v3.0 377
AutoFact: DNA methyltransferase [Nicotiana tabacum] 3.0e-37
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative DNA cytosine methyltransferase Zmet3 3.982e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain