Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: transcription regulator activity

Term: GO:0030528  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene10357 SustainPine v3.0 1440
• AutoFact: DNA-directed RNA polymerase beta chain, putative n=1 Tax=Ricinus communis RepID=B9RR32_RICCO 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 3.807e-15
N-terminus
sp_v3.0_unigene10992 SustainPine v3.0 644
• AutoFact: Unassigned protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene11241 SustainPine v3.0 1238
• AutoFact: Putative Not1 N-terminal protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Not1 N-terminal domain, CCR4-Not complex component family protein, expressed 2.258e-09
N-terminus
sp_v3.0_unigene11907 SustainPine v3.0 2444
• AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene12281 SustainPine v3.0 803
• AutoFact: CCR4-NOT transcription complex subunit 2 [Arabidopsis thaliana] gb|AEE28167.1| CCR4-NOT transcription complex subunit 2 [Arabidopsis thaliana] 3.0e-29
• FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: NOT2/NOT3/NOT5 family protein, expressed 6.299e-10
N-terminus
sp_v3.0_unigene12456 SustainPine v3.0 3075
• AutoFact: Hexokinase n=1 Tax=Citrus sinensis RepID=Q9FVD3_CITSI 0.0
• FL-Next: sp=Hexokinase-1; Spinacia oleracea (Spinach). 0.0
• Sma3: Hexokinase 1.12524e-42
Complete
sp_v3.0_unigene12509 SustainPine v3.0 926
• AutoFact: transcription initiation factor TFIID subunit D4 [Arabidopsis thaliana] gb|AAR28022.1| TAF5 [Arabidopsis thaliana] gb|AED93406.1| transcription initiation factor TFIID subunit D4 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene12647 SustainPine v3.0 1792
• AutoFact: Response_reg multi-domain protein 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-b response regulator 2.708e-09
Complete
sp_v3.0_unigene13215 SustainPine v3.0 1000
• AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene13740 SustainPine v3.0 644
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene13795 SustainPine v3.0 838
• AutoFact: transcription factor bHLH76 [Arabidopsis thaliana] gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana] emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana] 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor GBOF-1 3.027e-10
C-terminus
sp_v3.0_unigene14139 SustainPine v3.0 519
• AutoFact: APO protein 3 [Arabidopsis thaliana] ref|NP_001119475.1| APO protein 3 [Arabidopsis thaliana] sp|Q9FH50.1|APO3_ARATH RecName: Full=APO protein 3, mitochondrial; Flags: Precursor dbj|BAB08879.1| unnamed protein product [Arabidopsis thaliana] gb|AED97538.1| 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: APO protein 3, mitochondrial, putative 3.983e-09
C-terminus
sp_v3.0_unigene14169 SustainPine v3.0 465
• AutoFact: Unassigned protein
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcriptional corepressor LEUNIG 1.89e-09
N-terminus
sp_v3.0_unigene14969 SustainPine v3.0 271
• AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Inducer of CBF expression 1 protein 3.035e-08
N-terminus
sp_v3.0_unigene15016 SustainPine v3.0 381
• AutoFact: Unassigned protein 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene15287 SustainPine v3.0 3222
• AutoFact: HLH domain containing protein 4.0e-13
• FL-Next: sp=Transcription factor BIM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene15574 SustainPine v3.0 642
• AutoFact: transcription factor bHLH68 [Arabidopsis thaliana] sp|Q8S3D1.2|BH068_ARATH RecName: Full=Transcription factor bHLH68; AltName: Full=Basic helix-loop-helix protein 68; Short=AtbHLH68; Short=bHLH 68; AltName: Full=Transcription factor EN 60; AltName: Full=b 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene15667 SustainPine v3.0 719
• AutoFact: Unassigned protein 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene16182 SustainPine v3.0 321
• AutoFact: FER-LIKE IRON DEFICIENCY-INDUCED transcription factor [Arabidopsis thaliana] sp|Q0V7X4.1|FIT_ARATH RecName: Full=Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR; AltName: Full=Basic helix-loop-helix protein 29; Short=AtbHLH29; S 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene17636 SustainPine v3.0 708
• AutoFact: Helix-loop-helix DNA-binding n=1 Tax=Medicago truncatula RepID=Q2HTT3_MEDTR 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain