Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: transcription regulator activity

Term: GO:0030528  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4277 SustainPine v3.0 748
• AutoFact: Helix-loop-helix protein 1 A (Fragment) n=4 Tax=Pinus RepID=A7Y5H7_PINSY 7.00649e-44
• FL-Next: tr=Helix-loop-helix protein 1A; Pinus taeda (Loblolly pine). 0.0
• Sma3: Helix-loop-helix protein 1A 3.899e-06
Internal
sp_v3.0_unigene4449 SustainPine v3.0 2587
• AutoFact: Not CCR4-Not complex component, N-terminal; tRNA-binding arm [Medicago truncatula] 0.0
• FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Not1 N-terminal domain, CCR4-Not complex component family protein, expressed 3.392e-09
Putative Complete
sp_v3.0_unigene4618 SustainPine v3.0 252
• AutoFact: LisH domain containing protein 1.0e-06
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcriptional corepressor LEUNIG 6.301e-12
N-terminus
sp_v3.0_unigene4778 SustainPine v3.0 140
• AutoFact: Unassigned protein 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene4782 SustainPine v3.0 315
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SQU6.1|PP216_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06430, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 2750; Flags: Precursor gb|AAF08573.1|AC01 9.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene4859 SustainPine v3.0 396
• AutoFact: Unassigned protein 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene5035 SustainPine v3.0 379
• AutoFact: Unassigned protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene5220 SustainPine v3.0 491
• AutoFact: HLH domain containing protein 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 9.366e-06
N-terminus
sp_v3.0_unigene5374 SustainPine v3.0 1037
• AutoFact: bHLH protein [Arabidopsis thaliana] 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Myc-like anthocyanin regulatory protein 2.131e-21
Complete
sp_v3.0_unigene5452 SustainPine v3.0 1388
• AutoFact: transcription factor bHLH66 [Arabidopsis thaliana] sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH 66; AltName: Full=Transcription factor EN 95; AltName: Full=b 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 1.921e-21
C-terminus
sp_v3.0_unigene5475 SustainPine v3.0 2755
• AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene5579 SustainPine v3.0 3443
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene5764 SustainPine v3.0 1597
• AutoFact: APO protein 2 [Arabidopsis thaliana] gb|AED96973.1| APO protein 2 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: APO protein 3, mitochondrial, putative 3.983e-09
C-terminus
sp_v3.0_unigene5805 SustainPine v3.0 1479
• AutoFact: Helix-loop-helix protein 1A n=1 Tax=Pinus taeda RepID=Q9SQ79_PINTA 0.0
• FL-Next: tr=Helix-loop-helix protein 1A; Pinus taeda (Loblolly pine). 0.0
• Sma3: Helix-loop-helix protein 1A 0.0
C-terminus
sp_v3.0_unigene6057 SustainPine v3.0 2091
• AutoFact: Helix-loop-helix DNA-binding [Medicago truncatula] 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Helix-loop-helix DNA-binding domain containing protein, expressed 5.729e-08
Complete
sp_v3.0_unigene6226 SustainPine v3.0 1693
• AutoFact: BHLH transcription factor n=1 Tax=Zea mays RepID=B6UBF8_MAIZE 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 1.789e-17
Putative Complete
sp_v3.0_unigene6244 SustainPine v3.0 2410
• AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gb|AED91455.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6291 SustainPine v3.0 1531
• AutoFact: transcription factor ABORTED MICROSPORES [Arabidopsis thaliana] sp|Q9ZVX2.2|AMS_ARATH RecName: Full=Transcription factor ABORTED MICROSPORES; AltName: Full=Basic helix-loop-helix protein 21; Short=AtbHLH21; Short=bHLH 21; AltName: Full=Transcription facto 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene6334 SustainPine v3.0 3350
• AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene6360 SustainPine v3.0 2120
• AutoFact: putative transcription factor BHLH10 [Arabidopsis thaliana] gb|AAD20667.1| unknown protein [Arabidopsis thaliana] 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain